RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 B4GALT3O60512 393 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 RPA1P27694 616 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 ARL2P36404 184 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 PHKA2P46019 1235 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 TRAPPC10P48553 1259 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
TMEM253-203ENST00000554329 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
TMEM253-203ENST00000554329 CAMK1Q14012 370 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 CLUL1Q15846 466 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 FOXD4L6Q3SYB3 417 aaPredicted RBP12.88□□□□□ -0.35
TMEM253-203ENST00000554329 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 UBXN11Q5T124 520 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 FOXD4L3Q6VB84 417 aaPredicted RBP12.88□□□□□ -0.35
TMEM253-203ENST00000554329 ZNF598Q86UK7 904 aaKnown RBP12.88□□□□□ -0.35
TMEM253-203ENST00000554329 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 CLP1Q92989 425 aaKnown RBP12.88□□□□□ -0.35
TMEM253-203ENST00000554329 POLR3CQ9BUI4 534 aaPredicted RBP12.88□□□□□ -0.35
TMEM253-203ENST00000554329 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
TMEM253-203ENST00000554329 NPHP3-ACAD11A0A0J9YXS1 232 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 H3BQ06 376 aaPredicted RBP12.87□□□□□ -0.35
TMEM253-203ENST00000554329 TSPAN1O60635 241 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 DGAT1O75907 488 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 SSBP05455 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM253-203ENST00000554329 SYT1P21579 422 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 HOXA11P31270 313 aaPredicted RBP12.87□□□□□ -0.35
TMEM253-203ENST00000554329 FAM189BP81408 668 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 ATP2C1P98194 919 aaPredicted RBP12.87□□□□□ -0.35
TMEM253-203ENST00000554329 MBTD1Q05BQ5 628 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 ODR4Q5SWX8 454 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 DTHD1Q6ZMT9 781 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 RBM23Q86U06 439 aaKnown RBP12.87□□□□□ -0.35
TMEM253-203ENST00000554329 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 COLGALT1Q8NBJ5 622 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 TCP11Q8WWU5 503 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 MRPL38Q96DV4 380 aaKnown RBP12.87□□□□□ -0.35
TMEM253-203ENST00000554329 PNMA5Q96PV4 448 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 JPH2Q9BR39 696 aaPredicted RBP12.87□□□□□ -0.35
TMEM253-203ENST00000554329 RUSC1Q9BVN2 902 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 TSHZ2Q9NRE2 1034 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 FAM105AQ9NUU6 356 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 CACNG4Q9UBN1 327 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 PLAGL2Q9UPG8 496 aa12.87□□□□□ -0.35
TMEM253-203ENST00000554329 A0A0U1RQF3 1178 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 SFI1A8K8P3 1242 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 POU3F3P20264 500 aaPredicted RBP12.86□□□□□ -0.35
TMEM253-203ENST00000554329 MARCKSP29966 332 aaPredicted RBP12.86□□□□□ -0.35
TMEM253-203ENST00000554329 PTENP60484 403 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 RESTQ13127 1097 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 DHX8Q14562 1220 aaKnown RBP12.86□□□□□ -0.35
TMEM253-203ENST00000554329 SF3A1Q15459 793 aaKnown RBP12.86□□□□□ -0.35
TMEM253-203ENST00000554329 AMHR2Q16671 573 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 RILPL1Q5EBL4 403 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 TMEM173Q86WV6 379 aaPredicted RBP12.86□□□□□ -0.35
TMEM253-203ENST00000554329 THNSL1Q8IYQ7 743 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 ABI1Q8IZP0 508 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 SPPL3Q8TCT6 385 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 SAMD11Q96NU1 681 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 NACC1Q96RE7 527 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 DNAJB4Q9UDY4 337 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 PCDHB2Q9Y5E7 798 aa12.86□□□□□ -0.35
TMEM253-203ENST00000554329 C5orf67F2Z3F1 127 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 PER2O15055 1255 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 ERLIN2O94905 339 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 NPTXRO95502 500 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 POMCP01189 267 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 ARF4P18085 180 aaPredicted RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 KCNA5P22460 613 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 AKAP5P24588 427 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 CA8P35219 290 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 ERVFC1P60507 584 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 HYAL1Q12794 435 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 ORC2Q13416 577 aaPredicted RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 PLPP4Q5VZY2 271 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 HAUS3Q68CZ6 603 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 AGMOQ6ZNB7 445 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 SRGAP1Q7Z6B7 1085 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 SMG8Q8ND04 991 aaKnown RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 BCL7CQ8WUZ0 217 aaPredicted RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 RABGGTAQ92696 567 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 CLIC6Q96NY7 704 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 C11orf84Q9BUA3 381 aaPredicted RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 TMEM117Q9H0C3 514 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 NXF3Q9H4D5 531 aaKnown RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 KLK14Q9P0G3 267 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
TMEM253-203ENST00000554329 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 MYH15Q9Y2K3 1946 aa12.85□□□□□ -0.35
TMEM253-203ENST00000554329 BRWD1Q9NSI6 2320 aa12.84□□□□□ -0.35
TMEM253-203ENST00000554329 F8W810 466 aa12.84□□□□□ -0.35
TMEM253-203ENST00000554329 HIP1RO75146 1068 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms