RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 MRPL43Q8N983 215 aaKnown RBP20.98■□□□□ 0.95
CPSF2-203ENST00000554290 PRPF31Q8WWY3 499 aaKnown RBP20.98■□□□□ 0.95
CPSF2-203ENST00000554290 PGBD4Q96DM1 585 aa20.98■□□□□ 0.95
CPSF2-203ENST00000554290 TMEM169Q96HH4 297 aa20.98■□□□□ 0.95
CPSF2-203ENST00000554290 LXNQ9BS40 222 aa20.98■□□□□ 0.95
CPSF2-203ENST00000554290 DHX33Q9H6R0 707 aaKnown RBP20.98■□□□□ 0.95
CPSF2-203ENST00000554290 ZSWIM4Q9H7M6 989 aa20.98■□□□□ 0.95
CPSF2-203ENST00000554290 IFT122Q9HBG6 1241 aa20.98■□□□□ 0.95
CPSF2-203ENST00000554290 FAM105AQ9NUU6 356 aa20.98■□□□□ 0.95
CPSF2-203ENST00000554290 ASAP2O43150 1006 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 DTNBO60941 627 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 ZC3H11AO75152 810 aaKnown RBP eCLIP20.97■□□□□ 0.95
CPSF2-203ENST00000554290 YWHABP31946 246 aaKnown RBP20.97■□□□□ 0.95
CPSF2-203ENST00000554290 CBX2Q14781 532 aaPredicted RBP20.97■□□□□ 0.95
CPSF2-203ENST00000554290 NOMO2Q5JPE7 1267 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 LLGL2Q6P1M3 1020 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 SRGAP1Q7Z6B7 1085 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 ZNF579Q8NAF0 562 aaKnown RBP20.97■□□□□ 0.95
CPSF2-203ENST00000554290 TCP11Q8WWU5 503 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 SUSD6Q92537 303 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 EDAQ92838 391 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 LPPQ93052 612 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 RPGRIP1Q96KN7 1286 aa20.97■□□□□ 0.95
CPSF2-203ENST00000554290 WRAP73Q9P2S5 460 aaPredicted RBP20.97■□□□□ 0.95
CPSF2-203ENST00000554290 NT5C1B-RDH14C9J2C7 533 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 SRGAP2CP0DJJ0 459 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 CA8P35219 290 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 RNASELQ05823 741 aaKnown RBP20.96■□□□□ 0.95
CPSF2-203ENST00000554290 LAMTOR4Q0VGL1 99 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 NR5A1Q13285 461 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 LONRF3Q496Y0 759 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 XKR9Q5GH70 373 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 EARS2Q5JPH6 523 aaKnown RBP20.96■□□□□ 0.95
CPSF2-203ENST00000554290 NECAB1Q8N987 351 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 TMEM87AQ8NBN3 555 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 CASP10Q92851 521 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 TMEM143Q96AN5 459 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 DYDC2Q96IM9 177 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 MFSD14AQ96MC6 490 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 S1PR5Q9H228 398 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 AGPAT5Q9NUQ2 364 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 RGL1Q9NZL6 768 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 INPP5FQ9Y2H2 1132 aa20.96■□□□□ 0.95
CPSF2-203ENST00000554290 C2orf71A6NGG8 1288 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 CXCL14O95715 111 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 FDPSP14324 419 aaKnown RBP20.95■□□□□ 0.94
CPSF2-203ENST00000554290 TPRNQ4KMQ1 711 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 SYCE2Q6PIF2 218 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 GTF3C6Q969F1 213 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 TBC1D13Q9NVG8 400 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 PCDHA12Q9UN75 941 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 PCDHB2Q9Y5E7 798 aa20.95■□□□□ 0.94
CPSF2-203ENST00000554290 FAM205CA6NFA0 338 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 OFD1O75665 1012 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 CYP4A11Q02928 519 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 SPIRE1Q08AE8 756 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 TRIM29Q14134 588 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 CTTNQ14247 550 aaKnown RBP20.94■□□□□ 0.94
CPSF2-203ENST00000554290 EMC2Q15006 297 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 ME3Q16798 604 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 ERICH6BQ5W0A0 696 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 HFE2Q6ZVN8 426 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 TPH2Q8IWU9 490 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 VPS52Q8N1B4 723 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 URGCPQ8TCY9 931 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 TNFRSF25Q93038 417 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 APOL5Q9BWW9 433 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 KCNH6Q9H252 994 aa20.94■□□□□ 0.94
CPSF2-203ENST00000554290 BMP2KQ9NSY1 1161 aaPredicted RBP20.94■□□□□ 0.94
CPSF2-203ENST00000554290 GALTP07902 379 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
CPSF2-203ENST00000554290 NEK4P51957 841 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 GIT2Q14161 759 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 MXD4Q14582 209 aaPredicted RBP20.93■□□□□ 0.94
CPSF2-203ENST00000554290 CALCRLQ16602 461 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 CES5AQ6NT32 575 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 MRPL10Q7Z7H8 261 aaKnown RBP20.93■□□□□ 0.94
CPSF2-203ENST00000554290 DDX53Q86TM3 631 aaKnown RBP20.93■□□□□ 0.94
CPSF2-203ENST00000554290 FERMT3Q86UX7 667 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 RNF149Q8NC42 400 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 IGSF21Q96ID5 467 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 MTRQ99707 1265 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 GBP3Q9H0R5 595 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 NRDE2Q9H7Z3 1164 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 KANSL3Q9P2N6 904 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 HCFC2Q9Y5Z7 792 aa20.93■□□□□ 0.94
CPSF2-203ENST00000554290 MEIS3P2A8K0S8 358 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 CLASP2O75122 1294 aaKnown RBP20.92■□□□□ 0.94
CPSF2-203ENST00000554290 ERLIN2O94905 339 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 SLITRK3O94933 977 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 ZXDAP98168 799 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 ITIH3Q06033 890 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 NCBP1Q09161 790 aaKnown RBP20.92■□□□□ 0.94
CPSF2-203ENST00000554290 PCBP1Q15365 356 aaKnown RBP eCLIP20.92■□□□□ 0.94
CPSF2-203ENST00000554290 TRIM67Q6ZTA4 783 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 CNNM3Q8NE01 707 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 NSUN7Q8NE18 718 aaKnown RBP20.92■□□□□ 0.94
CPSF2-203ENST00000554290 EIF2AK1Q9BQI3 630 aaKnown RBP20.92■□□□□ 0.94
CPSF2-203ENST00000554290 TTC12Q9H892 705 aaPredicted RBP20.92■□□□□ 0.94
CPSF2-203ENST00000554290 MINDY3Q9H8M7 445 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms