RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 HSPA8P11142 646 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 ATP1A3P13637 1013 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 CDK11BP21127 795 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 NR2F2P24468 414 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 CDC25BP30305 580 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 PHKA2P46019 1235 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 CTCFP49711 727 aaPredicted RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 CLCN3P51790 818 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 MARSP56192 900 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 PTENP60484 403 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 IGBP1P78318 339 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 PTPN11Q06124 597 aaPredicted RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 STRN3Q13033 797 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 DRP2Q13474 957 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 HSP90AA2PQ14568 343 aaPredicted RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 PCBP1Q15365 356 aaKnown RBP eCLIP8.4□□□□□ -1.06
TDP1-209ENST00000554180 KCNA10Q16322 511 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 PKN2Q16513 984 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 LHX8Q68G74 356 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 TAF2Q6P1X5 1199 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 CXCL17Q6UXB2 119 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 FILIP1Q7Z7B0 1213 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 IFNLR1Q8IU57 520 aaPredicted RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 ZBTB8OSQ8IWT0 167 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 SYCP3Q8IZU3 236 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 METTL13Q8N6R0 699 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 ARRDC4Q8NCT1 418 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 MRFAP1L1Q96HT8 127 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 MKNK1Q9BUB5 465 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 KIFC3Q9BVG8 833 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 SRRTQ9BXP5 876 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 TRIM5Q9C035 493 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 AGPAT3Q9NRZ7 376 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 SAMSN1Q9NSI8 373 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 SETD4Q9NVD3 440 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 MAGEC2Q9UBF1 373 aaPredicted RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 LIMA1Q9UHB6 759 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 GTF2IRD1Q9UHL9 959 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 KCNJ18B7U540 433 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 K7ERI5 159 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 HNRNPDLO14979 420 aaKnown RBP8.39□□□□□ -1.07
TDP1-209ENST00000554180 KIAA0391O15091 583 aaKnown RBP8.39□□□□□ -1.07
TDP1-209ENST00000554180 MAPK13O15264 365 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 TGFB1I1O43294 461 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 ADCY5O95622 1261 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 SERPINC1P01008 464 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 TPM2P07951 284 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 ZNF75DP51815 510 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 ACLYP53396 1101 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
TDP1-209ENST00000554180 FANCCQ00597 558 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 PLCB2Q00722 1185 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 PPP2R3AQ06190 1150 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 KCNA1Q09470 495 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 CCDC173Q0VFZ6 552 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 ADAM9Q13443 819 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 KCNJ12Q14500 433 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 KRT31Q15323 416 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 MAPK6Q16659 721 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 FAM187BQ17R55 369 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 NBPF20Q3BBV1 942 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 TCP11X2Q5H9J9 407 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 FBXO46Q6PJ61 603 aaPredicted RBP8.39□□□□□ -1.07
TDP1-209ENST00000554180 ZPBP2Q6X784 338 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 TAS1R3Q7RTX0 852 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
TDP1-209ENST00000554180 IRF2BP1Q8IU81 584 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 RHPN2Q8IUC4 686 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 KIAA0319LQ8IZA0 1049 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 NME8Q8N427 588 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 RNF149Q8NC42 400 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 SH3TC2Q8TF17 1288 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 CNOT6LQ96LI5 555 aaKnown RBP8.39□□□□□ -1.07
TDP1-209ENST00000554180 PRIMPOLQ96LW4 560 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 CCDC113Q9H0I3 377 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 HDAC6Q9UBN7 1215 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 AKT3Q9Y243 479 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 MYH11P35749 1972 aa8.39□□□□□ -1.07
TDP1-209ENST00000554180 A0A1B0GTH6 734 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 KBTBD13C9JR72 458 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 DNM1LO00429 736 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 AP5Z1O43299 807 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 EPB41P11171 864 aaKnown RBP8.38□□□□□ -1.07
TDP1-209ENST00000554180 CYP2C9P11712 490 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 CAPN2P17655 700 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 GARTP22102 1010 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 GPC3P51654 580 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 UBASH3AP57075 661 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 ENPEPQ07075 957 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 FILIP1LQ4L180 1135 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 SLFN12LQ6IEE8 588 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 SRGAP1Q7Z6B7 1085 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 FRMD5Q7Z6J6 570 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 RPAINQ86UA6 219 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 ARMC5Q96C12 935 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 BICD1Q96G01 975 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 NLRP4Q96MN2 994 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms