RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TUT1Q9H6E5 874 aaKnown RBP10.25□□□□□ -0.77
SIX4-202ENST00000554079 PAG1Q9NWQ8 432 aa10.25□□□□□ -0.77
SIX4-202ENST00000554079 NID2Q14112 1375 aa10.25□□□□□ -0.77
SIX4-202ENST00000554079 IGSF1Q8N6C5 1336 aa10.25□□□□□ -0.77
SIX4-202ENST00000554079 NKRFO15226 690 aaKnown RBP eCLIP10.24□□□□□ -0.77
SIX4-202ENST00000554079 RNF113AO15541 343 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 CBX6O95503 412 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 RASSF2P50749 326 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 RELAQ04206 551 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 TBL3Q12788 808 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 SLC29A2Q14542 456 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 CYB5R4Q7L1T6 521 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 RALYLQ86SE5 291 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 ALDH16A1Q8IZ83 802 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 RASGEF1CQ8N431 466 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 SYT2Q8N9I0 419 aaPredicted RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 GFM2Q969S9 779 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 CADM1Q9BY67 442 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.24□□□□□ -0.77
SIX4-202ENST00000554079 WASF2Q9Y6W5 498 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 SLIT3O75094 1523 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 PHRF1Q9P1Y6 1649 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 CCDC162PA2VCL2 907 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 FAM205CA6NFA0 338 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 ZNF862O60290 1169 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 CREB1P16220 341 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 PLCG2P16885 1265 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 TAC1P20366 129 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 CRABP2P29373 138 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 ARPC4P59998 168 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 DSG1Q02413 1049 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 HNRNPDQ14103 355 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 RPS6KA1Q15418 735 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 INAQ16352 499 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 DUPD1Q68J44 220 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 PDXDC1Q6P996 788 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 ZNF449Q6P9G9 518 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 ZDHHC24Q6UX98 284 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 IZUMO2Q6UXV1 221 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 PATL1Q86TB9 770 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 MICU3Q86XE3 530 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 SCAIQ8N9R8 606 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 OSBP2Q969R2 916 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 MAGEB18Q96M61 343 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 CCDC113Q9H0I3 377 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 RBM38Q9H0Z9 239 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 SYNCQ9H7C4 482 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 COPRSQ9NQ92 184 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 SAP30BPQ9UHR5 308 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 RASAL2Q9UJF2 1139 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 DBR1Q9UK59 544 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 DENND2AQ9ULE3 1009 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 STXBP5LQ9Y2K9 1186 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 UTP11Q9Y3A2 253 aaKnown RBP10.24□□□□□ -0.77
SIX4-202ENST00000554079 TOPAZ1Q8N9V7 1692 aa10.24□□□□□ -0.77
SIX4-202ENST00000554079 UBR1Q8IWV7 1749 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 PITPNM2Q9BZ72 1349 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 TRIM75PA6NK02 468 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 KRIT1O00522 736 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 MAPK13O15264 365 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 ZBTB43O43298 467 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 ADAM23O75077 832 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 GH1P01241 217 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 SMIM18P0DKX4 95 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 TCF7P36402 384 aaPredicted RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 SLCO1A2P46721 670 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 RFX5P48382 616 aaPredicted RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 CCT8P50990 548 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 CCR3P51677 355 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 NSUN2Q08J23 767 aaKnown RBP eCLIP10.23□□□□□ -0.77
SIX4-202ENST00000554079 MOGSQ13724 837 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 SPTY2D1Q68D10 685 aaPredicted RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 GDAP1Q8TB36 358 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 DTX3LQ8TDB6 740 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 WASF1Q92558 559 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 ESR2Q92731 530 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 PRICKLE1Q96MT3 831 aaPredicted RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 PPP1R10Q96QC0 940 aaKnown RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 LRRC37BQ96QE4 947 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 OSBPL10Q9BXB5 764 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 NR2E3Q9Y5X4 410 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 COL22A1Q8NFW1 1626 aaPredicted RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 BCORQ6W2J9 1755 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 RASGRF2O14827 1237 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 SPTLC1O15269 473 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 DCTN3O75935 186 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 FGAP02671 866 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 RXRGP48443 463 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 EIF4A1P60842 406 aaKnown RBP10.23□□□□□ -0.77
SIX4-202ENST00000554079 CDC16Q13042 620 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 MPP2Q14168 576 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 CCDC153Q494R4 210 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 KLHDC10Q6PID8 442 aa10.23□□□□□ -0.77
SIX4-202ENST00000554079 KSR2Q6VAB6 950 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms