RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 UNC80Q8N2C7 3258 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 INO80B-WBP1J3KQ70 363 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 HOXA2O43364 376 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 EOMESO95936 686 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 HSP90AA1P07900 732 aaKnown RBP22.58■■□□□ 1.21
FOXA1-203ENST00000553751 GPM6BQ13491 265 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 ZRSR1Q15695 479 aaKnown RBP22.58■■□□□ 1.21
FOXA1-203ENST00000553751 AMHR2Q16671 573 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 CLLU1OSQ5K130 101 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 CDCA2Q69YH5 1023 aaPredicted RBP22.58■■□□□ 1.21
FOXA1-203ENST00000553751 RNF169Q8NCN4 708 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 CASD1Q96PB1 797 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 TMEM117Q9H0C3 514 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 ZSCAN16Q9H4T2 348 aaPredicted RBP22.58■■□□□ 1.21
FOXA1-203ENST00000553751 FAM105AQ9NUU6 356 aa22.58■■□□□ 1.21
FOXA1-203ENST00000553751 SPTBN5Q9NRC6 3674 aaKnown RBP22.57■■□□□ 1.2
FOXA1-203ENST00000553751 REV3LO60673 3130 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 LRRIQ4A6NIV6 560 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 ERLIN2O94905 339 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 RB1P06400 928 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 RAB27AP51159 221 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 TMEM119Q4V9L6 283 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 UBXN11Q5T124 520 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 KCTD17Q8N5Z5 321 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 C11orf84Q9BUA3 381 aaPredicted RBP22.57■■□□□ 1.2
FOXA1-203ENST00000553751 PLVAPQ9BX97 442 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 NT5C3AQ9H0P0 336 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 HCSTQ9UBK5 93 aa22.57■■□□□ 1.2
FOXA1-203ENST00000553751 LONP1P36776 959 aaKnown RBP22.56■■□□□ 1.2
FOXA1-203ENST00000553751 CABP7Q86V35 215 aa22.56■■□□□ 1.2
FOXA1-203ENST00000553751 PLIN2Q99541 437 aa22.56■■□□□ 1.2
FOXA1-203ENST00000553751 RUSC1Q9BVN2 902 aa22.56■■□□□ 1.2
FOXA1-203ENST00000553751 MYH15Q9Y2K3 1946 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 SLC26A4O43511 780 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 ZNF623O75123 536 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 SKIP12755 728 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 AXLP30530 894 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 NAMPTP43490 491 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.55■■□□□ 1.2
FOXA1-203ENST00000553751 ABI1Q8IZP0 508 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 SLC17A8Q8NDX2 589 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 HELQQ8TDG4 1101 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 KIFAP3Q92845 792 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 LPPQ93052 612 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 P2RX5Q93086 422 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 MRPL38Q96DV4 380 aaKnown RBP22.55■■□□□ 1.2
FOXA1-203ENST00000553751 CDK5RAP3Q96JB5 506 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 USP28Q96RU2 1077 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 CWH43Q9H720 699 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 POLD4Q9HCU8 107 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 PRDM6Q9NQX0 595 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 TYW1Q9NV66 732 aaKnown RBP22.55■■□□□ 1.2
FOXA1-203ENST00000553751 FBXO2Q9UK22 296 aaPredicted RBP22.55■■□□□ 1.2
FOXA1-203ENST00000553751 PCDHB2Q9Y5E7 798 aa22.55■■□□□ 1.2
FOXA1-203ENST00000553751 MEIS3P2A8K0S8 358 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 B4GALT5O43286 388 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 CEBPZQ03701 1054 aaKnown RBP22.54■■□□□ 1.2
FOXA1-203ENST00000553751 RINT1Q6NUQ1 792 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 PPP4R3CPQ6ZMV5 832 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 LRRC55Q6ZSA7 311 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 C1orf186Q6ZWK4 172 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 DAW1Q8N136 415 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 LRRC43Q8N309 656 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 CCDC51Q96ER9 411 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 CPB2Q96IY4 423 aa22.54■■□□□ 1.2
FOXA1-203ENST00000553751 MORC2Q9Y6X9 1032 aaPredicted RBP22.54■■□□□ 1.2
FOXA1-203ENST00000553751 ATG2AQ2TAZ0 1938 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 GRM6O15303 877 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 ARF4P18085 180 aaPredicted RBP22.53■■□□□ 1.2
FOXA1-203ENST00000553751 MARCKSP29966 332 aaPredicted RBP22.53■■□□□ 1.2
FOXA1-203ENST00000553751 UBA7P41226 1012 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 PPP2R5AQ15172 486 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 PTPROQ16827 1216 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 LONRF3Q496Y0 759 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 NOTUMQ6P988 496 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 MRPL10Q7Z7H8 261 aaKnown RBP22.53■■□□□ 1.2
FOXA1-203ENST00000553751 ZBTB8OSQ8IWT0 167 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 SPRYD3Q8NCJ5 442 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 LRRC15Q8TF66 581 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 CCDC113Q9H0I3 377 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 CSRNP2Q9H175 543 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 C2orf40Q9H1Z8 148 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 FZD8Q9H461 694 aa22.53■■□□□ 1.2
FOXA1-203ENST00000553751 HIP1RO75146 1068 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 ITGB1P05556 798 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 PDIA4P13667 645 aaKnown RBP22.52■■□□□ 1.2
FOXA1-203ENST00000553751 SLC12A3P55017 1021 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 MAPK7Q13164 816 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 FAM187BQ17R55 369 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 NAALADL2Q58DX5 795 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 SPOUT1Q5T280 376 aaKnown RBP22.52■■□□□ 1.2
FOXA1-203ENST00000553751 SYT2Q8N9I0 419 aaPredicted RBP22.52■■□□□ 1.2
FOXA1-203ENST00000553751 KLHL23Q8NBE8 558 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 COLGALT1Q8NBJ5 622 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 CALML4Q96GE6 196 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 IFT74Q96LB3 600 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 PRIMPOLQ96LW4 560 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 KIFC3Q9BVG8 833 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 EIF2AQ9BY44 585 aaKnown RBP22.52■■□□□ 1.2
FOXA1-203ENST00000553751 ALG13Q9NP73 1137 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms