RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 PCDHGC5Q9Y5F6 944 aa12.93□□□□□ -0.34
CCNK-202ENST00000553636 ASAP2O43150 1006 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 FGF18O76093 207 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 EOMESO95936 686 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 U2AF2P26368 475 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCNK-202ENST00000553636 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCNK-202ENST00000553636 PBX3P40426 434 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 MCM2P49736 904 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 TOB1P50616 345 aaPredicted RBP12.92□□□□□ -0.34
CCNK-202ENST00000553636 LEXMQ3ZCV2 418 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 LRRC55Q6ZSA7 311 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 MAEAQ7L5Y9 396 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 ADGRD2Q7Z7M1 963 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 CATSPER3Q86XQ3 398 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 PABPC5Q96DU9 382 aaKnown RBP12.92□□□□□ -0.34
CCNK-202ENST00000553636 ZNF558Q96NG5 402 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 POLR3FQ9H1D9 316 aaPredicted RBP12.92□□□□□ -0.34
CCNK-202ENST00000553636 PCDHB6Q9Y5E3 794 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 VCANP13611 3396 aa12.92□□□□□ -0.34
CCNK-202ENST00000553636 SPTBN5Q9NRC6 3674 aaKnown RBP12.91□□□□□ -0.34
CCNK-202ENST00000553636 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 H3BQV1 296 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 LINC01565O15544 149 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 ERLIN2O94905 339 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 SKIP12755 728 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCNK-202ENST00000553636 RAB27AP51159 221 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 PTGDRQ13258 359 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 CAPSQ13938 189 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 TFDP1Q14186 410 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 MXD4Q14582 209 aaPredicted RBP12.91□□□□□ -0.34
CCNK-202ENST00000553636 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 KCNT2Q6UVM3 1135 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 C4orf32Q8N8J7 132 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.91□□□□□ -0.34
CCNK-202ENST00000553636 PPP2R3CQ969Q6 453 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
CCNK-202ENST00000553636 TRAIPQ9BWF2 469 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 MRPL9Q9BYD2 267 aaKnown RBP12.91□□□□□ -0.34
CCNK-202ENST00000553636 GPRC5CQ9NQ84 441 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 INPP5FQ9Y2H2 1132 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 PCDHB2Q9Y5E7 798 aa12.91□□□□□ -0.34
CCNK-202ENST00000553636 INO80B-WBP1J3KQ70 363 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 IL9P15248 144 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 GLRA2P23416 452 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 RPA1P27694 616 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 ARL2P36404 184 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 CCT6AP40227 531 aaKnown RBP12.9□□□□□ -0.34
CCNK-202ENST00000553636 NRIP1P48552 1158 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 PTENP60484 403 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 UBE3AQ05086 875 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 COL19A1Q14993 1142 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 CLUL1Q15846 466 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 HAUS3Q68CZ6 603 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 PTCRAQ6ISU1 281 aaPredicted RBP12.9□□□□□ -0.34
CCNK-202ENST00000553636 GLB1LQ6UWU2 654 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 RBM23Q86U06 439 aaKnown RBP12.9□□□□□ -0.34
CCNK-202ENST00000553636 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 MICAL1Q8TDZ2 1067 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 NACC1Q96RE7 527 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 TLR9Q9NR96 1032 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.34
CCNK-202ENST00000553636 DBR1Q9UK59 544 aaKnown RBP12.9□□□□□ -0.34
CCNK-202ENST00000553636 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 ARHGEF35A5YM69 484 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 NCK2O43639 380 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 TSPAN1O60635 241 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 ZNF623O75123 536 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 ZC3H11AO75152 810 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCNK-202ENST00000553636 TBX10O75333 385 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 XRCC6P12956 609 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCNK-202ENST00000553636 HOXA11P31270 313 aaPredicted RBP12.89□□□□□ -0.35
CCNK-202ENST00000553636 PPM1AP35813 382 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 LTBRP36941 435 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 ERVFC1P60507 584 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 MBTD1Q05BQ5 628 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 DLX2Q07687 328 aaPredicted RBP12.89□□□□□ -0.35
CCNK-202ENST00000553636 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 NOMO2Q5JPE7 1267 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 UBXN11Q5T124 520 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 MCPH1Q8NEM0 835 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 SNX29Q8TEQ0 813 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
CCNK-202ENST00000553636 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 TLE6Q9H808 572 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 SPG21Q9NZD8 308 aa12.89□□□□□ -0.35
CCNK-202ENST00000553636 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
CCNK-202ENST00000553636 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
CCNK-202ENST00000553636 PP2D1A8MPX8 630 aa12.88□□□□□ -0.35
CCNK-202ENST00000553636 NT5C1B-RDH14C9J2C7 533 aa12.88□□□□□ -0.35
CCNK-202ENST00000553636 NDUFV1P49821 464 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms