RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GLRA2P23416 452 aa20.31■□□□□ 0.84
SHMT2-206ENST00000553529 GJB2P29033 226 aa20.31■□□□□ 0.84
SHMT2-206ENST00000553529 NRIP1P48552 1158 aa20.31■□□□□ 0.84
SHMT2-206ENST00000553529 PTCRAQ6ISU1 281 aaPredicted RBP20.31■□□□□ 0.84
SHMT2-206ENST00000553529 BSNDQ8WZ55 320 aa20.31■□□□□ 0.84
SHMT2-206ENST00000553529 PABPC5Q96DU9 382 aaKnown RBP20.31■□□□□ 0.84
SHMT2-206ENST00000553529 EIF2AQ9BY44 585 aaKnown RBP20.31■□□□□ 0.84
SHMT2-206ENST00000553529 LMAN2LQ9H0V9 348 aa20.31■□□□□ 0.84
SHMT2-206ENST00000553529 POLR3FQ9H1D9 316 aaPredicted RBP20.31■□□□□ 0.84
SHMT2-206ENST00000553529 FAM105AQ9NUU6 356 aa20.31■□□□□ 0.84
SHMT2-206ENST00000553529 RAPGEFL1Q9UHV5 662 aa20.31■□□□□ 0.84
SHMT2-206ENST00000553529 TTLL13PA6NNM8 815 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 TSPAN1O60635 241 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 CDC25AP30304 524 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 ARL2P36404 184 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 GNL2Q13823 731 aaKnown RBP20.3■□□□□ 0.84
SHMT2-206ENST00000553529 AAK1Q2M2I8 961 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 CTC1Q2NKJ3 1217 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 PLPP4Q5VZY2 271 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 KCNT2Q6UVM3 1135 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 OTUD6AQ7L8S5 288 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 FEZF2Q8TBJ5 459 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 DNAJB4Q9UDY4 337 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 BARX2Q9UMQ3 279 aaPredicted RBP20.3■□□□□ 0.84
SHMT2-206ENST00000553529 HES2Q9Y543 173 aa20.3■□□□□ 0.84
SHMT2-206ENST00000553529 TTC28Q96AY4 2481 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 HIDE1A8MVS5 230 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 DKC1O60832 514 aaKnown RBP eCLIP20.29■□□□□ 0.84
SHMT2-206ENST00000553529 EDN1P05305 212 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.84
SHMT2-206ENST00000553529 AMHR2Q16671 573 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 AGMOQ6ZNB7 445 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 ZNF280BQ86YH2 543 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 ABI1Q8IZP0 508 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 LRRC43Q8N309 656 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 GBP3Q9H0R5 595 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 EPHX3Q9H6B9 360 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 ANKEF1Q9NU02 776 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 CLEC1BQ9P126 229 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 CDH22Q9UJ99 828 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 PCDHB2Q9Y5E7 798 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 PCDHB12Q9Y5F1 795 aa20.29■□□□□ 0.84
SHMT2-206ENST00000553529 GRXCR2A6NFK2 248 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 FSCN2O14926 492 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 OFD1O75665 1012 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 MBTD1Q05BQ5 628 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 MCTP1Q6DN14 999 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 SMG8Q8ND04 991 aaKnown RBP20.28■□□□□ 0.84
SHMT2-206ENST00000553529 MICAL1Q8TDZ2 1067 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 AUTS2Q8WXX7 1259 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 JPH2Q9BR39 696 aaPredicted RBP20.28■□□□□ 0.84
SHMT2-206ENST00000553529 KIFC3Q9BVG8 833 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 TLR9Q9NR96 1032 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 TBC1D13Q9NVG8 400 aa20.28■□□□□ 0.84
SHMT2-206ENST00000553529 C5orf42Q9H799 3197 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 INO80B-WBP1J3KQ70 363 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 ST18O60284 1047 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 ZC3H11AO75152 810 aaKnown RBP eCLIP20.27■□□□□ 0.84
SHMT2-206ENST00000553529 LAG3P18627 525 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 BCAR1P56945 870 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 PTENP60484 403 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 PTGDRQ13258 359 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 ADAM15Q13444 863 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 SRGAP1Q7Z6B7 1085 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 SLC39A11Q8N1S5 342 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 VN1R3Q9BXE9 311 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 INO80BQ9C086 356 aaPredicted RBP20.27■□□□□ 0.84
SHMT2-206ENST00000553529 CXCL16Q9H2A7 254 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 NRDE2Q9H7Z3 1164 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 CHST12Q9NRB3 414 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 DACT1Q9NYF0 836 aa20.27■□□□□ 0.84
SHMT2-206ENST00000553529 F8W810 466 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 DGAT1O75907 488 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 DDHD2O94830 711 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 TCP11Q8WWU5 503 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 MRPS27Q92552 414 aaKnown RBP20.26■□□□□ 0.83
SHMT2-206ENST00000553529 ZNF558Q96NG5 402 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 TCF25Q9BQ70 676 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 APOL6Q9BWW8 343 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 APOL5Q9BWW9 433 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 TUFT1Q9NNX1 390 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 CACNG4Q9UBN1 327 aa20.26■□□□□ 0.83
SHMT2-206ENST00000553529 EOMESO95936 686 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 POMCP01189 267 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 ARF4P18085 180 aaPredicted RBP20.25■□□□□ 0.83
SHMT2-206ENST00000553529 CCT6AP40227 531 aaKnown RBP20.25■□□□□ 0.83
SHMT2-206ENST00000553529 NDUFV1P49821 464 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 NAALADL2Q58DX5 795 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 LLGL2Q6P1M3 1020 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 KCNK18Q7Z418 384 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 FAM178BQ8IXR5 827 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 ZNF710Q8N1W2 664 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 CCDC43Q96MW1 224 aaKnown RBP20.25■□□□□ 0.83
SHMT2-206ENST00000553529 MMTAG2Q9BU76 263 aaKnown RBP20.25■□□□□ 0.83
SHMT2-206ENST00000553529 POLR3CQ9BUI4 534 aaPredicted RBP20.25■□□□□ 0.83
SHMT2-206ENST00000553529 TRAIPQ9BWF2 469 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 NXF3Q9H4D5 531 aaKnown RBP20.25■□□□□ 0.83
SHMT2-206ENST00000553529 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.25■□□□□ 0.83
SHMT2-206ENST00000553529 MIOSQ9NXC5 875 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms