RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 CAPSQ13938 189 aa26.19■■□□□ 1.78
TDP1-205ENST00000553527 LPPQ93052 612 aa26.19■■□□□ 1.78
TDP1-205ENST00000553527 CASD1Q96PB1 797 aa26.19■■□□□ 1.78
TDP1-205ENST00000553527 RNF19AQ9NV58 838 aa26.19■■□□□ 1.78
TDP1-205ENST00000553527 HOXA2O43364 376 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 EOMESO95936 686 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 PTENP60484 403 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 KLHL23Q8NBE8 558 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 MCPH1Q8NEM0 835 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 HELQQ8TDG4 1101 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 PLVAPQ9BX97 442 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 TMEM117Q9H0C3 514 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 BHMT2Q9H2M3 363 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 AGPAT5Q9NUQ2 364 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 FAM105AQ9NUU6 356 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 PLAGL2Q9UPG8 496 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 STK24Q9Y6E0 443 aa26.18■■□□□ 1.78
TDP1-205ENST00000553527 PLXNA4Q9HCM2 1894 aa26.17■■□□□ 1.78
TDP1-205ENST00000553527 LRRIQ4A6NIV6 560 aa26.17■■□□□ 1.78
TDP1-205ENST00000553527 ATF7P17544 494 aaPredicted RBP26.17■■□□□ 1.78
TDP1-205ENST00000553527 MUTP22033 750 aa26.17■■□□□ 1.78
TDP1-205ENST00000553527 TFF2Q03403 129 aa26.17■■□□□ 1.78
TDP1-205ENST00000553527 RESTQ13127 1097 aa26.17■■□□□ 1.78
TDP1-205ENST00000553527 PCDHB12Q9Y5F1 795 aa26.17■■□□□ 1.78
TDP1-205ENST00000553527 ATG2AQ2TAZ0 1938 aa26.17■■□□□ 1.78
TDP1-205ENST00000553527 E9PMD0 336 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 DLL1O00548 723 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 ZSCAN22P10073 491 aaPredicted RBP26.16■■□□□ 1.78
TDP1-205ENST00000553527 CYP11B2P19099 503 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 CLLU1OSQ5K130 101 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 LRRC55Q6ZSA7 311 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 ZNF598Q86UK7 904 aaKnown RBP26.16■■□□□ 1.78
TDP1-205ENST00000553527 CPB2Q96IY4 423 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 PLIN2Q99541 437 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 ZSCAN16Q9H4T2 348 aaPredicted RBP26.16■■□□□ 1.78
TDP1-205ENST00000553527 AAASQ9NRG9 546 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 DNM3Q9UQ16 869 aa26.16■■□□□ 1.78
TDP1-205ENST00000553527 TCF20Q9UGU0 1960 aaKnown RBP26.16■■□□□ 1.78
TDP1-205ENST00000553527 ITGB1P05556 798 aa26.15■■□□□ 1.78
TDP1-205ENST00000553527 SKIP12755 728 aa26.15■■□□□ 1.78
TDP1-205ENST00000553527 HOXA11P31270 313 aaPredicted RBP26.15■■□□□ 1.78
TDP1-205ENST00000553527 NCBP1Q09161 790 aaKnown RBP26.15■■□□□ 1.78
TDP1-205ENST00000553527 PKP1Q13835 747 aa26.15■■□□□ 1.78
TDP1-205ENST00000553527 FOXD4L5Q5VV16 416 aaPredicted RBP26.15■■□□□ 1.78
TDP1-205ENST00000553527 FOXD4L4Q8WXT5 416 aaPredicted RBP26.15■■□□□ 1.78
TDP1-205ENST00000553527 P2RX5Q93086 422 aa26.15■■□□□ 1.78
TDP1-205ENST00000553527 MMTAG2Q9BU76 263 aaKnown RBP26.15■■□□□ 1.78
TDP1-205ENST00000553527 CWH43Q9H720 699 aa26.15■■□□□ 1.78
TDP1-205ENST00000553527 PCDHB2Q9Y5E7 798 aa26.15■■□□□ 1.78
TDP1-205ENST00000553527 MEIS3P2A8K0S8 358 aa26.14■■□□□ 1.78
TDP1-205ENST00000553527 MBTD1Q05BQ5 628 aa26.14■■□□□ 1.78
TDP1-205ENST00000553527 POU5F1BQ06416 359 aa26.14■■□□□ 1.78
TDP1-205ENST00000553527 SF3A1Q15459 793 aaKnown RBP26.14■■□□□ 1.78
TDP1-205ENST00000553527 SPPL3Q8TCT6 385 aa26.14■■□□□ 1.78
TDP1-205ENST00000553527 ATXN2LQ8WWM7 1075 aaKnown RBP26.14■■□□□ 1.78
TDP1-205ENST00000553527 HLA-CQ95604 372 aa26.14■■□□□ 1.78
TDP1-205ENST00000553527 INPP5FQ9Y2H2 1132 aa26.14■■□□□ 1.78
TDP1-205ENST00000553527 XIRP2A4UGR9 3374 aa26.14■■□□□ 1.77
TDP1-205ENST00000553527 TSPAN1O60635 241 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 F13A1P00488 732 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 MRPS5P82675 430 aaKnown RBP26.13■■□□□ 1.77
TDP1-205ENST00000553527 TCEAL5Q5H9L2 206 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 FAM173BQ6P4H8 233 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 EP400NLQ6ZTU2 488 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 THNSL1Q8IYQ7 743 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 COLGALT1Q8NBJ5 622 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 POF1BQ8WVV4 589 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 TRAIPQ9BWF2 469 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 LMAN2LQ9H0V9 348 aa26.13■■□□□ 1.77
TDP1-205ENST00000553527 LIG1P18858 919 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 DNAJB1P25685 340 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 PBX3P40426 434 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 RAB27AP51159 221 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 TIGD5Q53EQ6 642 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 NAALADL2Q58DX5 795 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 UBXN11Q5T124 520 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 ARL6IP4Q66PJ3 421 aaKnown RBP26.12■■□□□ 1.77
TDP1-205ENST00000553527 KCNK18Q7Z418 384 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 IFNLR1Q8IU57 520 aaPredicted RBP26.12■■□□□ 1.77
TDP1-205ENST00000553527 LRRC43Q8N309 656 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 BSNDQ8WZ55 320 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 PGBD4Q96DM1 585 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 ASB2Q96Q27 587 aa26.12■■□□□ 1.77
TDP1-205ENST00000553527 NSUN3Q9H649 340 aaKnown RBP26.12■■□□□ 1.77
TDP1-205ENST00000553527 B4GALT5O43286 388 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 ZNF623O75123 536 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 EYA4O95677 639 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 SSBP05455 408 aaKnown RBP eCLIP26.11■■□□□ 1.77
TDP1-205ENST00000553527 LAG3P18627 525 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 CEBPZQ03701 1054 aaKnown RBP26.11■■□□□ 1.77
TDP1-205ENST00000553527 NOTUMQ6P988 496 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 CDR2LQ86X02 465 aaPredicted RBP26.11■■□□□ 1.77
TDP1-205ENST00000553527 ZBTB8OSQ8IWT0 167 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 CDK5RAP3Q96JB5 506 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 COL25A1Q9BXS0 654 aaPredicted RBP26.11■■□□□ 1.77
TDP1-205ENST00000553527 COG5Q9UP83 839 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 CLIC4Q9Y696 253 aa26.11■■□□□ 1.77
TDP1-205ENST00000553527 VCANP13611 3396 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 MYH11P35749 1972 aa26.1■■□□□ 1.77
TDP1-205ENST00000553527 FGF18O76093 207 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms