RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 PTPN21Q16825 1174 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 GORABQ5T7V8 394 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 ESRP1Q6NXG1 681 aaKnown RBP5.05□□□□□ -1.6
PCNX4-206ENST00000553513 POLNQ7Z5Q5 900 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 PALM2Q8IXS6 379 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 FUKQ8N0W3 1084 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 BCL6BQ8N143 479 aaPredicted RBP5.05□□□□□ -1.6
PCNX4-206ENST00000553513 EFHBQ8N7U6 833 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 OR14K1Q8NGZ2 314 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 COG1Q8WTW3 980 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 CFHR4Q92496 578 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 TSR2Q969E8 191 aaKnown RBP5.05□□□□□ -1.6
PCNX4-206ENST00000553513 GFM2Q969S9 779 aaKnown RBP5.05□□□□□ -1.6
PCNX4-206ENST00000553513 OR14A2Q96R54 314 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 PLA2G12BQ9BX93 195 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 CCDC8Q9H0W5 538 aaPredicted RBP5.05□□□□□ -1.6
PCNX4-206ENST00000553513 NELFAQ9H3P2 528 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 MYH16Q9H6N6 1097 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 ZNF180Q9UJW8 692 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 DENND2AQ9ULE3 1009 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 SLC30A1Q9Y6M5 507 aa5.05□□□□□ -1.6
PCNX4-206ENST00000553513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 SHTN1A0MZ66 631 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 PMS2P1A4D2B8 440 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 FAM83GA6ND36 823 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 SLC26A4O43511 780 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 SCGB1D2O95969 90 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 CD40P25942 277 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 ADCYAP1R1P41586 468 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 ID4P47928 161 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 RAB27AP51159 221 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 SESN3P58005 492 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 HGFACQ04756 655 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 MCL1Q07820 350 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 ADAM15Q13444 863 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 MYBPC3Q14896 1274 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 R3HDM1Q15032 1099 aaKnown RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 PRKD1Q15139 912 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 CCSAPQ6IQ19 270 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 LHFPL2Q6ZUX7 228 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 BMP8AQ7Z5Y6 402 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 PNMA8AQ86V59 439 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 SH3RF3Q8TEJ3 882 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 CHTF18Q8WVB6 975 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 SLC7A6OSQ96CW6 309 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 HOOK2Q96ED9 719 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 AHCYL2Q96HN2 611 aaKnown RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 H2AFY2Q9P0M6 372 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 TESMINQ9Y4I5 508 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 CTDP1Q9Y5B0 961 aaPredicted RBP5.04□□□□□ -1.6
PCNX4-206ENST00000553513 MRFAP1Q9Y605 127 aa5.04□□□□□ -1.6
PCNX4-206ENST00000553513 MATN3O15232 486 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 AKAP10O43572 662 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 PEX14O75381 377 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 MAP4K4O95819 1239 aaPredicted RBP5.03□□□□□ -1.6
PCNX4-206ENST00000553513 CFBP00751 764 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 ADCY2Q08462 1091 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 DUSP8Q13202 625 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 HDAC1Q13547 482 aaPredicted RBP5.03□□□□□ -1.6
PCNX4-206ENST00000553513 LRRC32Q14392 662 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 DDB1Q16531 1140 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 AMOTL1Q8IY63 956 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 RAVER1Q8IY67 606 aaKnown RBP5.03□□□□□ -1.6
PCNX4-206ENST00000553513 SMC1BQ8NDV3 1235 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 RTF1Q92541 710 aaKnown RBP5.03□□□□□ -1.6
PCNX4-206ENST00000553513 EDAQ92838 391 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 GCDHQ92947 438 aaPredicted RBP5.03□□□□□ -1.6
PCNX4-206ENST00000553513 FAM89AQ96GI7 184 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 DYDC2Q96IM9 177 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 ADOQ96SZ5 270 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 MENTQ9BUN1 341 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 EMC7Q9NPA0 242 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
PCNX4-206ENST00000553513 MAGEL2Q9UJ55 1249 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 SYNPO2Q9UMS6 1093 aa5.03□□□□□ -1.6
PCNX4-206ENST00000553513 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 PRKD3O94806 890 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 PRPF6O94906 941 aaKnown RBP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 APOL3O95236 402 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 TNFRSF1AP19438 455 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 ANTXR2P58335 489 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 HLTFQ14527 1009 aaKnown RBP eCLIP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 MLC1Q15049 377 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 BRD3Q15059 726 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 ABCB5Q2M3G0 1257 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 KIAA1841Q6NSI8 718 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 SLC4A10Q6U841 1118 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 KANSL1Q7Z3B3 1105 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 SHCBP1Q8NEM2 672 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 MORC4Q8TE76 937 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 RABGGTAQ92696 567 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 SLC5A5Q92911 643 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 NKD2Q969F2 451 aaPredicted RBP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 WDR92Q96MX6 357 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 HAPLN2Q9GZV7 340 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 SLC6A15Q9H2J7 730 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 POFUT1Q9H488 388 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms