RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 OVCH2Q7RTZ1 564 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 TMC6Q7Z403 805 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 AMIGO3Q86WK7 504 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 PROSER1Q86XN7 944 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 SPICE1Q8N0Z3 855 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 RPGRQ92834 1020 aaKnown RBP6.38□□□□□ -1.39
SCFD1-209ENST00000553280 ELAC2Q9BQ52 826 aaKnown RBP6.38□□□□□ -1.39
SCFD1-209ENST00000553280 ACE2Q9BYF1 805 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-209ENST00000553280 TMEM60Q9H2L4 133 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 MTG2Q9H4K7 406 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 SLC39A2Q9NP94 309 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 NGRNQ9NPE2 291 aaKnown RBP6.38□□□□□ -1.39
SCFD1-209ENST00000553280 INCENPQ9NQS7 918 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 TAGLN3Q9UI15 199 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 LIMCH1Q9UPQ0 1083 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 WASF3Q9UPY6 502 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 CDY2AQ9Y6F7 541 aa6.38□□□□□ -1.39
SCFD1-209ENST00000553280 A0A0A6YYJ9 748 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 HRKO00198 91 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 PMM2O15305 246 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 HTRA2O43464 458 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-209ENST00000553280 PCDH8O95206 1070 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 MYBP10242 640 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 ECE1P42892 770 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 GJA9P57773 515 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 YBX1P67809 324 aaKnown RBP6.37□□□□□ -1.39
SCFD1-209ENST00000553280 MALLQ13021 153 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 ADRM1Q16186 407 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 ZNF385BQ569K4 471 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 IGDCC4Q8TDY8 1250 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 GAB3Q8WWW8 586 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 PITHD1Q9GZP4 211 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-209ENST00000553280 PHTF1Q9UMS5 762 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 USP18Q9UMW8 372 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 IPPQ9Y573 584 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 HCFC2Q9Y5Z7 792 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 IRAK3Q9Y616 596 aa6.37□□□□□ -1.39
SCFD1-209ENST00000553280 CCDC154A6NI56 674 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 CREB3O43889 395 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 OPHN1O60890 802 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 DTNBO60941 627 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 UBXN7O94888 489 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 CELA3BP08861 270 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 INHBBP09529 407 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 APEX1P27695 318 aaKnown RBP6.36□□□□□ -1.39
SCFD1-209ENST00000553280 CDR1P51861 262 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 NKX3-2P78367 333 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 PPARAQ07869 468 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 TMEM62Q0P6H9 643 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 LLGL1Q15334 1064 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 CR1LQ2VPA4 569 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 MUM1L1Q5H9M0 696 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 C10orf62Q5T681 223 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-209ENST00000553280 LRSAM1Q6UWE0 723 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 BTNL9Q6UXG8 535 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 ETV3LQ6ZN32 361 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 TOGARAM2Q6ZUX3 1019 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 MORC1Q86VD1 984 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 DENND1CQ8IV53 801 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 KIAA0319LQ8IZA0 1049 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 CAMKK1Q8N5S9 505 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 CDYL2Q8N8U2 506 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 PPP1R35Q8TAP8 253 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 SIGLEC10Q96LC7 697 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 BTBD2Q9BX70 525 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 NAA15Q9BXJ9 866 aaKnown RBP6.36□□□□□ -1.39
SCFD1-209ENST00000553280 KLHL11Q9NVR0 708 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 KCMF1Q9P0J7 381 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 FTSJ1Q9UET6 329 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 PCDHB6Q9Y5E3 794 aa6.36□□□□□ -1.39
SCFD1-209ENST00000553280 FAM227AF5H4B4 570 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 RFXAPO00287 272 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 ABLIM1O14639 778 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 N4BP3O15049 544 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 B3GALT2O43825 422 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 STAT5AP42229 794 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 NCKAP1LP55160 1127 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 CCT2P78371 535 aaKnown RBP6.35□□□□□ -1.39
SCFD1-209ENST00000553280 NFATC3Q12968 1075 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 DHX8Q14562 1220 aaKnown RBP6.35□□□□□ -1.39
SCFD1-209ENST00000553280 PLEKHN1Q494U1 663 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-209ENST00000553280 OLFML2BQ68BL8 750 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 ZC3H14Q6PJT7 736 aaKnown RBP6.35□□□□□ -1.39
SCFD1-209ENST00000553280 FAM156AQ8NDB6 213 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 MZB1Q8WU39 189 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 NRG4Q8WWG1 115 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 GJA10Q969M2 543 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 OR10A5Q9H207 317 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 BCAS3Q9H6U6 928 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 GREM2Q9H772 168 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 EVLQ9UI08 416 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-209ENST00000553280 SCOCQ9UIL1 159 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 L1RE1Q9UN81 338 aa6.35□□□□□ -1.39
SCFD1-209ENST00000553280 MAFO75444 373 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-209ENST00000553280 ALDH2P05091 517 aa6.34□□□□□ -1.39
SCFD1-209ENST00000553280 SLC5A1P13866 664 aa6.34□□□□□ -1.39
SCFD1-209ENST00000553280 GSPT1P15170 499 aaKnown RBP6.34□□□□□ -1.39
SCFD1-209ENST00000553280 BMP7P18075 431 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms