RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MTFMTQ96DP5 389 aaKnown RBP6.99□□□□□ -1.29
SCFD1-208ENST00000553278 PTPN18Q99952 460 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 ISCA1Q9BUE6 129 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 GREM2Q9H772 168 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 AGO4Q9HCK5 861 aaKnown RBP6.99□□□□□ -1.29
SCFD1-208ENST00000553278 PGAP2Q9UHJ9 254 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 ACSL6Q9UKU0 697 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 USP18Q9UMW8 372 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 PCDHGB3Q9Y5G1 929 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 MSL3P1P0C860 447 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 GLI4P10075 376 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 GSPT1P15170 499 aaKnown RBP6.98□□□□□ -1.29
SCFD1-208ENST00000553278 FAHP16930 419 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 PRKCAP17252 672 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 XPAP23025 273 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-208ENST00000553278 IL6STP40189 918 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-208ENST00000553278 MCAMP43121 646 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 GPR15P49685 360 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 RAB1AP62820 205 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 CHRNEQ04844 493 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 FGL2Q14314 439 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 PUM3Q15397 648 aaKnown RBP6.98□□□□□ -1.29
SCFD1-208ENST00000553278 CCDC178Q5BJE1 867 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 FAM209BQ5JX69 171 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 BICRALQ6AI39 1079 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 FAM180AQ6UWF9 173 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 GPR155Q7Z3F1 870 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 CDYL2Q8N8U2 506 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 SHKBP1Q8TBC3 707 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 GAB3Q8WWW8 586 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 KAT5Q92993 513 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 KIAA1191Q96A73 305 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 PAWRQ96IZ0 340 aaKnown RBP6.98□□□□□ -1.29
SCFD1-208ENST00000553278 MYLK2Q9H1R3 596 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 KIAA1586Q9HCI6 787 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 BTBD7Q9P203 1132 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 ARHGAP28Q9P2N2 729 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 CDC23Q9UJX2 597 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 NUDT5Q9UKK9 219 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 SCINQ9Y6U3 715 aa6.98□□□□□ -1.29
SCFD1-208ENST00000553278 PRRT4C9JH25 899 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 GSC2O15499 205 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 SGSM2O43147 1006 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 PHGDHO43175 533 aaKnown RBP6.97□□□□□ -1.29
SCFD1-208ENST00000553278 ZGLP1P0C6A0 271 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 DDIT3P35638 169 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 TECP42680 631 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 STT3AP46977 705 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 RGS3P49796 1198 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 ICA1Q05084 483 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 DBPQ10586 325 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-208ENST00000553278 IL10RAQ13651 578 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 SPPL2CQ8IUH8 684 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 DRC7Q8IY82 874 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 MYCT1Q8N699 235 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 DPF2Q92785 391 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 ARL8AQ96BM9 186 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 ZC3H10Q96K80 434 aaKnown RBP6.97□□□□□ -1.29
SCFD1-208ENST00000553278 TBATAQ96M53 351 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 C22orf23Q9BZE7 217 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 MTG2Q9H4K7 406 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 UCKL1Q9NWZ5 548 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCFD1-208ENST00000553278 EBF1Q9UH73 591 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 LAS1LQ9Y4W2 734 aaKnown RBP6.97□□□□□ -1.29
SCFD1-208ENST00000553278 PCDHB6Q9Y5E3 794 aa6.97□□□□□ -1.29
SCFD1-208ENST00000553278 A0A087WV62 115 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 FAM171A2A8MVW0 826 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 NCK2O43639 380 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 NRP2O60462 931 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 CELA3BP08861 270 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 CASP2P42575 452 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 MAPK10P53779 464 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 CYP4F8P98187 520 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 DSC2Q02487 901 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 PRKCQQ04759 706 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 ZNF543Q08ER8 600 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 IKZF1Q13422 519 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 BLMHQ13867 455 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 NR0B2Q15466 257 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 AOC3Q16853 763 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 CCDC38Q502W7 563 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 JAKMIP3Q5VZ66 844 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 PGBD2Q6P3X8 592 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 LMBR1LQ6UX01 489 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 PPHLN1Q8NEY8 458 aaKnown RBP6.96□□□□□ -1.3
SCFD1-208ENST00000553278 GCC1Q96CN9 775 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 PEX11GQ96HA9 241 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 MPP4Q96JB8 637 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 C7orf25Q9BPX7 421 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 ADAMTS10Q9H324 1103 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 PNPLA8Q9NP80 782 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 SAGE1Q9NXZ1 904 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 LMCD1Q9NZU5 365 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 SLAMF8Q9P0V8 285 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 VAV3Q9UKW4 847 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 SIT1Q9Y3P8 196 aa6.96□□□□□ -1.3
SCFD1-208ENST00000553278 ADAMTS3O15072 1205 aa6.95□□□□□ -1.3
SCFD1-208ENST00000553278 OPHN1O60890 802 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms