RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SMARCAD1Q9H4L7 1026 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 IL17RBQ9NRM6 502 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 ERAP1Q9NZ08 941 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 TUBE1Q9UJT0 475 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 SSX2IPQ9Y2D8 614 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 TRPV2Q9Y5S1 764 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 MAST4O15021 2626 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 PARP14Q460N5 1801 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 FRMPD2Q68DX3 1309 aaPredicted RBP5.96□□□□□ -1.46
CKAP4-203ENST00000553039 CCDC171Q6TFL3 1326 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 PLIN4Q96Q06 1357 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 CCDC195A0A1B0GUA6 201 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 MBLAC1A4D2B0 266 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 C9IYK1 514 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ARHGAP33O14559 1287 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 SCAMP3O14828 347 aaKnown RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 RPS6KA5O75582 802 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 CFBP00751 764 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ZFYP08048 801 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ZNF806P0C7X5 589 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 CTSAP10619 480 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ZSCAN20P17040 1043 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 UBA1P22314 1058 aaKnown RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 NOVP48745 357 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 KRT76Q01546 638 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 PPARAQ07869 468 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ZNF543Q08ER8 600 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 MLF2Q15773 248 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 GRIK4Q16099 956 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 LPAL2Q16609 132 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 MSS51Q4VC12 460 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 STPG1Q5TH74 334 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ZNF852Q6ZMS4 543 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 STOX1Q6ZVD7 989 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 DDX53Q86TM3 631 aaKnown RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 LRRC43Q8N309 656 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 SEPT1Q8WYJ6 367 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 ZCCHC14Q8WYQ9 949 aaKnown RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 RSPH1Q8WYR4 309 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 MAP4K1Q92918 833 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 PHKBQ93100 1093 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 KIF1BPQ96EK5 621 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 MYADMQ96S97 322 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 SENP7Q9BQF6 1050 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 PDCD2LQ9BRP1 358 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 BACH2Q9BYV9 841 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 FAM49AQ9H0Q0 323 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 NAPBQ9H115 298 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 IL1RAPL2Q9NP60 686 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 LTB4R2Q9NPC1 389 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 TCP11L1Q9NUJ3 509 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 DOLKQ9UPQ8 538 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 VPS9D1Q9Y2B5 631 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 RBM19Q9Y4C8 960 aaKnown RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 PCDHGA11Q9Y5H2 935 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 PCDHA2Q9Y5H9 948 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 DNMT3AQ9Y6K1 912 aaPredicted RBP5.95□□□□□ -1.46
CKAP4-203ENST00000553039 IGSF9BQ9UPX0 1349 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 CEP295Q9C0D2 2601 aa5.95□□□□□ -1.46
CKAP4-203ENST00000553039 SPATA31C2B4DYI2 1134 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 BHMG1C9JSJ3 638 aaPredicted RBP5.94□□□□□ -1.46
CKAP4-203ENST00000553039 ANHXE9PGG2 379 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 MAN2B1O00754 1011 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 RNF113AO15541 343 aaKnown RBP5.94□□□□□ -1.46
CKAP4-203ENST00000553039 LRRN2O75325 713 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 DXOO77932 396 aaKnown RBP5.94□□□□□ -1.46
CKAP4-203ENST00000553039 C1RP00736 705 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 PDHBP11177 359 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 CTHP32929 405 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 CXCL12P48061 93 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 CCR3P51677 355 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 FOXC1Q12948 553 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 TSNAXIP1Q2TAA8 658 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 DAB2IPQ5VWQ8 1189 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 TSSK4Q6SA08 328 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 CEP68Q76N32 757 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 PDZD3Q86UT5 571 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 SCUBE3Q8IX30 993 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 SLC39A11Q8N1S5 342 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 HDAC7Q8WUI4 952 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 APPBP2Q92624 585 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 LOXL4Q96JB6 756 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 CASD1Q96PB1 797 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 TMEM47Q9BQJ4 181 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 MRPL9Q9BYD2 267 aaKnown RBP5.94□□□□□ -1.46
CKAP4-203ENST00000553039 TMX1Q9H3N1 280 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 COL20A1Q9P218 1284 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 ST3GAL5Q9UNP4 418 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 EXOC6BQ9Y2D4 811 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 MTF2Q9Y483 593 aaPredicted RBP5.94□□□□□ -1.46
CKAP4-203ENST00000553039 KDM3AQ9Y4C1 1321 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 NLRC5Q86WI3 1866 aa5.94□□□□□ -1.46
CKAP4-203ENST00000553039 SMIM35A0A1B0GVV1 85 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 RBAK-RBAKDNI3L0D1 243 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 SNPHO15079 494 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms