RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-215ENST00000552931 SLITRK3O94933 977 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 TDP2O95551 362 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 ITGB1P05556 798 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 ZSCAN20P17040 1043 aaPredicted RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 ATF7P17544 494 aaPredicted RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 LAG3P18627 525 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 NCLP19338 710 aaKnown RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 RAB27AP51159 221 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 HMGN5P82970 282 aaKnown RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 MXD4Q14582 209 aaPredicted RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 UGCGQ16739 394 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 INF2Q27J81 1249 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 KIZQ2M2Z5 673 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 KRT40Q6A162 431 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 OTUD6AQ7L8S5 288 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 ECHDC2Q86YB7 292 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 CNNM3Q8NE01 707 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 CCDC51Q96ER9 411 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 AIFM3Q96NN9 605 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 OSMRQ99650 979 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 KIF2CQ99661 725 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 MRPL9Q9BYD2 267 aaKnown RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 GCOM2Q9BZD3 368 aaPredicted RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 FOXP1Q9H334 677 aaPredicted RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 CERS4Q9HA82 394 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 BRMS1Q9HCU9 246 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 NAP1L2Q9ULW6 460 aaPredicted RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 LIMCH1Q9UPQ0 1083 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 SAMM50Q9Y512 469 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 PCDHB12Q9Y5F1 795 aa6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 MRPL42Q9Y6G3 142 aaKnown RBP6.79□□□□□ -1.32
SMARCC2-215ENST00000552931 DENND3A2RUS2 1198 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 DDX39AO00148 427 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 DGAT1O75907 488 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 UPP2O95045 317 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 BAG4O95429 457 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 EFEMP2O95967 443 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 VTNP04004 478 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 HOXB8P17481 243 aaPredicted RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 SFPQP23246 707 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 BRD2P25440 801 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 U2AF2P26368 475 aaKnown RBP eCLIP6.78□□□□□ -1.328e-12■■■■□ 23
SMARCC2-215ENST00000552931 HOXA11P31270 313 aaPredicted RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 CTNNB1P35222 781 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 KRT2P35908 639 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 PHKA2P46019 1235 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 CLCN3P51790 818 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 NEK4P51957 841 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 POLGP54098 1239 aaPredicted RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 FOXK2Q01167 660 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 NHLH1Q02575 133 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 HYAL1Q12794 435 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 NFX1Q12986 1120 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 SMAD4Q13485 552 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 GIT2Q14161 759 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 PDIA5Q14554 519 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 FAM187BQ17R55 369 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 LETM2Q2VYF4 491 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 TCEAL5Q5H9L2 206 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 EARS2Q5JPH6 523 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 TMEM164Q5U3C3 297 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 PHLDB3Q6NSJ2 640 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 ADHFE1Q8IWW8 467 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 CKAP2LQ8IYA6 745 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 LRRC43Q8N309 656 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 METTL13Q8N6R0 699 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 KLHL23Q8NBE8 558 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 SMRP1Q8NCR6 262 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 FBXO18Q8NFZ0 1043 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 TCP11Q8WWU5 503 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 SLC7A3Q8WY07 619 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 SUSD6Q92537 303 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 MRPS27Q92552 414 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 UBXN4Q92575 508 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 ZBTB10Q96DT7 871 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 POLR3CQ9BUI4 534 aaPredicted RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 ATP6V0A4Q9HBG4 840 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 UBN1Q9NPG3 1134 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 AGPAT5Q9NUQ2 364 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 KANSL3Q9P2N6 904 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 DBR1Q9UK59 544 aaKnown RBP6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 PCDHA12Q9UN75 941 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 ADGRG1Q9Y653 693 aa6.78□□□□□ -1.32
SMARCC2-215ENST00000552931 CNTNAP2Q9UHC6 1331 aa6.77□□□□□ -1.32
SMARCC2-215ENST00000552931 BTBD18B2RXH4 712 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 LAD1O00515 517 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 CCNT1O60563 726 aaKnown RBP6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 ALADP13716 330 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 DNAJB1P25685 340 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 RPA1P27694 616 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 YWHABP31946 246 aaKnown RBP6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 ARL2P36404 184 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 MARSP56192 900 aaKnown RBP6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 PTENP60484 403 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 ZP2Q05996 745 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 ST3GAL1Q11201 340 aa6.77□□□□□ -1.33
SMARCC2-215ENST00000552931 DUSP6Q16828 381 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms