RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 UBA7P41226 1012 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 SARSP49591 514 aaKnown RBP12.68□□□□□ -0.38
TMEM116-218ENST00000552839 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM116-218ENST00000552839 UBE3AQ05086 875 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 PAK2Q13177 524 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 KCNC3Q14003 757 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 SPOUT1Q5T280 376 aaKnown RBP12.68□□□□□ -0.38
TMEM116-218ENST00000552839 PDXDC2PQ6P474 469 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 LINC00301Q8NCQ3 95 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 TRAPPC12Q8WVT3 735 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 CALML4Q96GE6 196 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 MTMR9Q96QG7 549 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 CDCA3Q99618 268 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-218ENST00000552839 CELF4Q9BZC1 486 aaKnown RBP12.68□□□□□ -0.38
TMEM116-218ENST00000552839 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 PCDHB7Q9Y5E2 793 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 PCDHB12Q9Y5F1 795 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 FSCN2O14926 492 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 EDIL3O43854 480 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 MGEA5O60502 916 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 PPP6R2O75170 966 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 SP100P23497 879 aaPredicted RBP12.67□□□□□ -0.38
TMEM116-218ENST00000552839 CYP4A11Q02928 519 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
TMEM116-218ENST00000552839 TMEM184AQ6ZMB5 413 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 ASCL5Q7RTU5 278 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 TRMT1LQ7Z2T5 733 aaKnown RBP12.67□□□□□ -0.38
TMEM116-218ENST00000552839 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
TMEM116-218ENST00000552839 AK8Q96MA6 479 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 FAM13BQ9NYF5 915 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 GABBR1Q9UBS5 961 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 CCDC39Q9UFE4 941 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 VAV3Q9UKW4 847 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 CACNA1HO95180 2353 aa12.67□□□□□ -0.38
TMEM116-218ENST00000552839 SMIM35A0A1B0GVV1 85 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 FSD2A1L4K1 749 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 TBKBP1A7MCY6 615 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 DHX15O43143 795 aaKnown RBP12.66□□□□□ -0.38
TMEM116-218ENST00000552839 CUTAO60888 179 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 CCNE2O96020 404 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 STAT5BP51692 787 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 PSMC5P62195 406 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 FOXK2Q01167 660 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 PLCB4Q15147 1175 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 PTPAQ15257 358 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 EPHA7Q15375 998 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 FAM102BQ5T8I3 360 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 PDE12Q6L8Q7 609 aaKnown RBP12.66□□□□□ -0.38
TMEM116-218ENST00000552839 SWSAP1Q6NVH7 229 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 ANKRD54Q6NXT1 300 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 SYCE2Q6PIF2 218 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 ZBTB33Q86T24 672 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 TPH2Q8IWU9 490 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 FAM167AQ96KS9 214 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 EIF2AK1Q9BQI3 630 aaKnown RBP12.66□□□□□ -0.38
TMEM116-218ENST00000552839 LXNQ9BS40 222 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 APOL5Q9BWW9 433 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 CDHR5Q9HBB8 845 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 ERVK-5Q9HDB9 667 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 AAASQ9NRG9 546 aa12.66□□□□□ -0.38
TMEM116-218ENST00000552839 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
TMEM116-218ENST00000552839 SEPT9Q9UHD8 586 aaPredicted RBP12.66□□□□□ -0.38
TMEM116-218ENST00000552839 SRPRBQ9Y5M8 271 aaKnown RBP12.66□□□□□ -0.38
TMEM116-218ENST00000552839 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 PTPRZ1P23471 2315 aaPredicted RBP12.65□□□□□ -0.38
TMEM116-218ENST00000552839 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
TMEM116-218ENST00000552839 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
TMEM116-218ENST00000552839 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.38
TMEM116-218ENST00000552839 SLC26A2P50443 739 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 NUBP1P53384 320 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 PDIA5Q14554 519 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 PLPP4Q5VZY2 271 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 CABP7Q86V35 215 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 NME8Q8N427 588 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 C4orf32Q8N8J7 132 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 ADAM2Q99965 735 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 NT5C3AQ9H0P0 336 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 CSRNP2Q9H175 543 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 CWH43Q9H720 699 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 ZSWIM4Q9H7M6 989 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 RGS18Q9NS28 235 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 CDH22Q9UJ99 828 aa12.65□□□□□ -0.38
TMEM116-218ENST00000552839 FBXO2Q9UK22 296 aaPredicted RBP12.65□□□□□ -0.38
TMEM116-218ENST00000552839 NOC2LQ9Y3T9 749 aaKnown RBP12.65□□□□□ -0.38
TMEM116-218ENST00000552839 MYH9P35579 1960 aaKnown RBP12.64□□□□□ -0.39
TMEM116-218ENST00000552839 C9IYK1 514 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 EML1O00423 815 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 PRKCEQ02156 737 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 CTTNQ14247 550 aaKnown RBP12.64□□□□□ -0.39
TMEM116-218ENST00000552839 LLGL2Q6P1M3 1020 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms