RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 APBB2Q92870 758 aa20.75■□□□□ 0.91
CTDSP2-207ENST00000551594 PAGE5Q96GU1 130 aa20.75■□□□□ 0.91
CTDSP2-207ENST00000551594 RNPC3Q96LT9 517 aaKnown RBP20.75■□□□□ 0.91
CTDSP2-207ENST00000551594 INO80BQ9C086 356 aaPredicted RBP20.75■□□□□ 0.91
CTDSP2-207ENST00000551594 BLZF1Q9H2G9 400 aa20.75■□□□□ 0.91
CTDSP2-207ENST00000551594 LAMA2P24043 3122 aaKnown RBP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 SLC16A4O15374 487 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 TBCAO75347 108 aaKnown RBP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 SFPQP23246 707 aaKnown RBP eCLIP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 ZNF131P52739 623 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 DMP1Q13316 513 aaPredicted RBP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 SNW1Q13573 536 aaKnown RBP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 CDCA2Q69YH5 1023 aaPredicted RBP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 FMR1NBQ8N0W7 255 aaPredicted RBP20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 ENGASEQ8NFI3 743 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 TRIM9Q9C026 710 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 MAGEF1Q9HAY2 307 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 PARVGQ9HBI0 331 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 KMT5AQ9NQR1 393 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 USP20Q9Y2K6 914 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 TRIOBPQ9H2D6 2365 aa20.74■□□□□ 0.91
CTDSP2-207ENST00000551594 PTPRSQ13332 1948 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 ABHD14A-ACY1A0A1B0GW23 586 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 ENPP3O14638 875 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 IDEP14735 1019 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 WDR5P61964 334 aaKnown RBP20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 CUL4BQ13620 913 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 ODR4Q5SWX8 454 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 KRBA2Q6ZNG9 492 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 ZBTB8OSQ8IWT0 167 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 TDHQ8IZJ6 230 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 C7orf25Q9BPX7 421 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 NFKBIZQ9BYH8 718 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 LRRC27Q9C0I9 530 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 C17orf75Q9HAS0 396 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 USP25Q9UHP3 1055 aa20.73■□□□□ 0.91
CTDSP2-207ENST00000551594 NR1I2O75469 434 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 BAIAP3O94812 1187 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 EDN1P05305 212 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 IBSPP21815 317 aaPredicted RBP20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 DEFB103AP81534 67 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 AMPD3Q01432 767 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 FAM160A1Q05DH4 1040 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 DSC3Q14574 896 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 AMHR2Q16671 573 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 TMCO2Q7Z6W1 182 aaPredicted RBP20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 SFR1Q86XK3 245 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 CNNM3Q8NE01 707 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 SPIRE2Q8WWL2 714 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 CPB2Q96IY4 423 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 GBP4Q96PP9 640 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 ADAM2Q99965 735 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 NTPCRQ9BSD7 190 aaKnown RBP20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 CCDC113Q9H0I3 377 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 C2orf40Q9H1Z8 148 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 PANK4Q9NVE7 773 aa20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 LARSQ9P2J5 1176 aaKnown RBP20.72■□□□□ 0.91
CTDSP2-207ENST00000551594 TTLL13PA6NNM8 815 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 B4GALT5O43286 388 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 TSPAN1O60635 241 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 NMT1P30419 496 aaKnown RBP20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 HOXA11P31270 313 aaPredicted RBP20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 UBE2HP62256 183 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 ASIC1P78348 528 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 TAS1R3Q7RTX0 852 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 FTHL17Q9BXU8 183 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 FZD8Q9H461 694 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 TBC1D7Q9P0N9 293 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 ARHGAP28Q9P2N2 729 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
CTDSP2-207ENST00000551594 FRMD3A2A2Y4 597 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 DENND3A2RUS2 1198 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 TRAK2O60296 914 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 ERLIN2O94905 339 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 PRKCBP05771 671 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 PRR29P0C7W0 189 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 KCNJ6P48051 423 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 SMTNP53814 917 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 NCKAP1LP55160 1127 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 HERC4Q5GLZ8 1057 aaPredicted RBP20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 FAM109BQ6ICB4 259 aaPredicted RBP20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 TMEM161BQ8NDZ6 487 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 HPS3Q969F9 1004 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 FIZ1Q96SL8 496 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 TSPYL2Q9H2G4 693 aaPredicted RBP20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 LMBRD1Q9NUN5 540 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 AGPAT5Q9NUQ2 364 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 TTC3P53804 2025 aa20.7■□□□□ 0.9
CTDSP2-207ENST00000551594 GRXCR1A8MXD5 290 aa20.69■□□□□ 0.9
CTDSP2-207ENST00000551594 K7ERI5 159 aa20.69■□□□□ 0.9
CTDSP2-207ENST00000551594 EFCAB14O75071 495 aa20.69■□□□□ 0.9
CTDSP2-207ENST00000551594 MAPTP10636 758 aaKnown RBP20.69■□□□□ 0.9
CTDSP2-207ENST00000551594 ZSCAN20P17040 1043 aaPredicted RBP20.69■□□□□ 0.9
CTDSP2-207ENST00000551594 GAP43P17677 238 aa20.69■□□□□ 0.9
CTDSP2-207ENST00000551594 ARF4P18085 180 aaPredicted RBP20.69■□□□□ 0.9
CTDSP2-207ENST00000551594 EFNA5P52803 228 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms