RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 CASP4P49662 377 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 PMS1P54277 932 aaKnown RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 SETDB1Q15047 1291 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 TAF1CQ15572 869 aaPredicted RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 SNRNP35Q16560 246 aaKnown RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 ZSCAN26Q16670 478 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 CEP57Q86XR8 500 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 TARS2Q9BW92 718 aaKnown RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 TBK1Q9UHD2 729 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 PCSK1NQ9UHG2 260 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 NRXN3Q9Y4C0 1643 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 SREBF1P36956 1147 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 RWDD2BP57060 319 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 BASP1P80723 227 aaKnown RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 TKFCQ3LXA3 575 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 EPC2Q52LR7 807 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 ANKRD13AQ8IZ07 590 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 TMEM35BQ8NCS4 154 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 ZCCHC17Q9NP64 241 aaKnown RBP12.52□□□□□ -0.4
LGR5-206ENST00000550851 SMARCAL1Q9NZC9 954 aa12.52□□□□□ -0.4
LGR5-206ENST00000550851 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.41
LGR5-206ENST00000550851 EVI5O60447 810 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 CIITAP33076 1130 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 ABCD1P33897 745 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
LGR5-206ENST00000550851 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
LGR5-206ENST00000550851 GEN1Q17RS7 908 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 PI4K2AQ9BTU6 479 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 GLIS2Q9BZE0 524 aaPredicted RBP12.52□□□□□ -0.41
LGR5-206ENST00000550851 RNF14Q9UBS8 474 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 NDC80O14777 642 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 RNF40O75150 1001 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 ZRANB2O95218 330 aaKnown RBP eCLIP12.52□□□□□ -0.41
LGR5-206ENST00000550851 SAT1P21673 171 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 SOX5P35711 763 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 DR1Q01658 176 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 SURF1Q15526 300 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 CFAP157Q5JU67 520 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 FAM81BQ96LP2 452 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 IDI2Q9BXS1 227 aa12.52□□□□□ -0.41
LGR5-206ENST00000550851 MOV10L1Q9BXT6 1211 aaKnown RBP12.52□□□□□ -0.41
LGR5-206ENST00000550851 SUCLA2Q9P2R7 463 aaPredicted RBP12.52□□□□□ -0.41
LGR5-206ENST00000550851 MRC1P22897 1456 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
LGR5-206ENST00000550851 CCL15-CCL14A0A0B4J2E2 113 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 FAM86B1E9PN63 330 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 FAM86B2P0C5J1 330 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 PLS3P13797 630 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 GNA15P30679 374 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 TGFB2P61812 414 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 CCL15Q16663 113 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 TTI2Q6NXR4 508 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 CEP128Q6ZU80 1094 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 SMAP1Q8IYB5 467 aaPredicted RBP12.51□□□□□ -0.41
LGR5-206ENST00000550851 KCTD6Q8NC69 237 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 TMEM150BA6NC51 233 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 WNT7AO00755 349 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 ZBTB39O15060 712 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 FOXP2O15409 715 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 MED7O43513 233 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 PSMA2P25787 234 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 ITKQ08881 620 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 DSTYKQ6XUX3 929 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 CCDC110Q8TBZ0 833 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 NUP85Q9BW27 656 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 MED4Q9NPJ6 270 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 GAKO14976 1311 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 RGL2O15211 777 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 PRKCBP05771 671 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 GPC3P51654 580 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 HUNKP57058 714 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
LGR5-206ENST00000550851 EMC2Q15006 297 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 VSIG1Q86XK7 387 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 CCDC13Q8IYE1 715 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 ZNF564Q8TBZ8 553 aaPredicted RBP12.51□□□□□ -0.41
LGR5-206ENST00000550851 HSPH1Q92598 858 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 CAPS2Q9BXY5 557 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 SEMA6BQ9H3T3 888 aa12.51□□□□□ -0.41
LGR5-206ENST00000550851 PITPNM2Q9BZ72 1349 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 ANO9A1A5B4 782 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 ASB14A6NK59 587 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 PIK3R2O00459 728 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 STAMBPO95630 424 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 ALDH3A1P30838 453 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 SOX10P56693 466 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 ACTR2P61160 394 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
LGR5-206ENST00000550851 KCNK18Q7Z418 384 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms