RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 TAS2R42Q7RTR8 314 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 ITPKCQ96DU7 683 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 TSSK1BQ9BXA7 367 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 TOM1L1O75674 476 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 PRLP01236 227 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 FGGP02679 453 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 PDIA3P30101 505 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 KIF2BQ8N4N8 673 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 MREGQ8N565 214 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 WNT8AQ9H1J5 351 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 ESYT2A0FGR8 921 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 TRIM43BA6NCK2 446 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 LRPAP1P30533 357 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 RNF43Q68DV7 783 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 NCCRP1Q6ZVX7 275 aaPredicted RBP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 NME9Q86XW9 330 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 SLC17A8Q8NDX2 589 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 ZFYVE19Q96K21 471 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 TMA7Q9Y2S6 64 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 AK5Q9Y6K8 562 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 ARPC4-TTLL3A0A0A6YYG9 625 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 HNRNPCL2B2RXH8 293 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 AXIN1O15169 862 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PFDN6O15212 129 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 AFPP02771 609 aaKnown RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PTGS2P35354 604 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 CLCN2P51788 898 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 NR1I3Q14994 352 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 SNX17Q15036 470 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 TRADDQ15628 312 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 DGUOKQ16854 277 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PDIK1LQ8N165 341 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 AGAP11Q8TF27 550 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 HPS1Q92902 700 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 RHOBTB2Q9BYZ6 727 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 RRN3Q9NYV6 651 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 WDR35Q9P2L0 1181 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 KLHL20Q9Y2M5 609 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 H3BNX3 289 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 AP3B1O00203 1094 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 COQ9O75208 318 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 VAV1P15498 845 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 CXCR5P32302 372 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 RAP1GAPP47736 663 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 CDK17Q00537 523 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 EFTUD2Q15029 972 aaKnown RBP eCLIP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 NEK10Q6ZWH5 1172 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 CATSPER3Q86XQ3 398 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 TTC13Q8NBP0 860 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PYROXD1Q8WU10 500 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 BLZF1Q9H2G9 400 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 CLEC4MQ9H2X3 399 aaPredicted RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 SCN3BQ9NY72 215 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 HDAC6Q9UBN7 1215 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 ZNF180Q9UJW8 692 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 CROTQ9UKG9 612 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 SQORQ9Y6N5 450 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 KANSL1LA0AUZ9 987 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 RBM47A0AV96 593 aaKnown RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 GOLGA8MH3BSY2 632 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 LPXNO60711 386 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 RFX1P22670 979 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 RAB25P57735 213 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 RUNX1T1Q06455 604 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 MCL1Q07820 350 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 KIAA1755Q5JYT7 1200 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 AAGABQ6PD74 315 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 ELMSAN1Q6PJG2 1045 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 TC2NQ8N9U0 490 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 FBXL13Q8NEE6 735 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 ZNF398Q8TD17 642 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 SYMPKQ92797 1274 aaKnown RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 BTBD10Q9BSF8 475 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 TRIM8Q9BZR9 551 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PCDH18Q9HCL0 1135 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 TTC7AQ9ULT0 858 aaPredicted RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 SLC4A4Q9Y6R1 1079 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 SHANK2Q9UPX8 1470 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PI4KAP2A4QPH2 592 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PCP11498 1178 aaKnown RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 HSD17B3P37058 310 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 EPHB1P54762 984 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 ARL6IP4Q66PJ3 421 aaKnown RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 DCUN1D2Q6PH85 259 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PDZD4Q76G19 769 aaPredicted RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PI4KAP1Q8N8J0 262 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 CCDC59Q9P031 241 aaKnown RBP9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 PNMA2Q9UL42 364 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 COL4A3BPQ9Y5P4 624 aa9.32□□□□□ -0.92
PPFIA2-220ENST00000550584 B2RBV5 119 aa9.31□□□□□ -0.92
PPFIA2-220ENST00000550584 SPAG6O75602 509 aa9.31□□□□□ -0.92
PPFIA2-220ENST00000550584 UBOX5O94941 541 aa9.31□□□□□ -0.92
PPFIA2-220ENST00000550584 HSPA4LO95757 839 aa9.31□□□□□ -0.92
PPFIA2-220ENST00000550584 ZCCHC18P0CG32 403 aa9.31□□□□□ -0.92
PPFIA2-220ENST00000550584 IDO1P14902 403 aa9.31□□□□□ -0.92
PPFIA2-220ENST00000550584 AOC3Q16853 763 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms