RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 RBM23Q86U06 439 aaKnown RBP7.74□□□□□ -1.17
CBX5-204ENST00000550411 SMAP1Q8IYB5 467 aaPredicted RBP7.74□□□□□ -1.17
CBX5-204ENST00000550411 ZNF710Q8N1W2 664 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 NME8Q8N427 588 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 EFHBQ8N7U6 833 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 TMEM40Q8WWA1 233 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 EDAQ92838 391 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 HAS1Q92839 578 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 TBC1D32Q96NH3 1257 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 CEP89Q96ST8 783 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 ZNF302Q9NR11 478 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 DISC1Q9NRI5 854 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 CLEC1BQ9P126 229 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 WRAP73Q9P2S5 460 aaPredicted RBP7.74□□□□□ -1.17
CBX5-204ENST00000550411 GABBR1Q9UBS5 961 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 DDX25Q9UHL0 483 aaKnown RBP7.74□□□□□ -1.17
CBX5-204ENST00000550411 LRFN2Q9ULH4 789 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 LIMCH1Q9UPQ0 1083 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 PCDHA2Q9Y5H9 948 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 NOTCH4Q99466 2003 aa7.74□□□□□ -1.17
CBX5-204ENST00000550411 CCDC194A0A1B0GVG4 234 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 BTBD18B2RXH4 712 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 HBP1O60381 514 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 EIF5BO60841 1220 aaKnown RBP7.73□□□□□ -1.17
CBX5-204ENST00000550411 IBSPP21815 317 aaPredicted RBP7.73□□□□□ -1.17
CBX5-204ENST00000550411 KRT2P35908 639 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 NRIP1P48552 1158 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 SARSP49591 514 aaKnown RBP7.73□□□□□ -1.17
CBX5-204ENST00000550411 GATMP50440 423 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 GUCY1B3Q02153 619 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
CBX5-204ENST00000550411 COASYQ13057 564 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 TARBP2Q15633 366 aaKnown RBP7.73□□□□□ -1.17
CBX5-204ENST00000550411 TMEM266Q2M3C6 531 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 LETM2Q2VYF4 491 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 ODR4Q5SWX8 454 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 TMCO4Q5TGY1 634 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 FAM160B1Q5W0V3 765 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 PPP4R3AQ6IN85 833 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 FAM43BQ6ZT52 329 aaPredicted RBP7.73□□□□□ -1.17
CBX5-204ENST00000550411 BMP8AQ7Z5Y6 402 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 NEK8Q86SG6 692 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 DIS3L2Q8IYB7 885 aaKnown RBP7.73□□□□□ -1.17
CBX5-204ENST00000550411 KIAA0319LQ8IZA0 1049 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 SMRP1Q8NCR6 262 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 TEKT3Q9BXF9 490 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 TMX1Q9H3N1 280 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 PRM3Q9NNZ6 103 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 PCDHB7Q9Y5E2 793 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 PCDHB12Q9Y5F1 795 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 PCDHA10Q9Y5I2 948 aa7.73□□□□□ -1.17
CBX5-204ENST00000550411 ATG2BQ96BY7 2078 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 FSD2A1L4K1 749 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 LOC730098B7Z3J9 87 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 HOXA2O43364 376 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 RPS6KA5O75582 802 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 GLP2RO95838 553 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 PSAPP07602 524 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
CBX5-204ENST00000550411 KLRC1P26715 233 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 CLCN3P51790 818 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 JAK3P52333 1124 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 ZXDAP98168 799 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 UBE3AQ05086 875 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 PPP2R5CQ13362 524 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 DRP2Q13474 957 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 CBX2Q14781 532 aaPredicted RBP7.72□□□□□ -1.17
CBX5-204ENST00000550411 RABEP1Q15276 862 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 ZNF484Q5JVG2 852 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 RDM1Q8NG50 284 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 MICAL1Q8TDZ2 1067 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 WASF1Q92558 559 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 PBXIP1Q96AQ6 731 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 LLPHQ9BRT6 129 aaKnown RBP7.72□□□□□ -1.17
CBX5-204ENST00000550411 PHF7Q9BWX1 381 aaPredicted RBP7.72□□□□□ -1.17
CBX5-204ENST00000550411 TMEM60Q9H2L4 133 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 TLE6Q9H808 572 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 ERVK-5Q9HDB9 667 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 TLR9Q9NR96 1032 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 AAASQ9NRG9 546 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 RGS18Q9NS28 235 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 C1orf112Q9NSG2 853 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 BARX2Q9UMQ3 279 aaPredicted RBP7.72□□□□□ -1.17
CBX5-204ENST00000550411 GINS2Q9Y248 185 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 NOC2LQ9Y3T9 749 aaKnown RBP7.72□□□□□ -1.17
CBX5-204ENST00000550411 USP15Q9Y4E8 981 aaPredicted RBP7.72□□□□□ -1.17
CBX5-204ENST00000550411 PCDHGC5Q9Y5F6 944 aa7.72□□□□□ -1.17
CBX5-204ENST00000550411 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.71□□□□□ -1.18
CBX5-204ENST00000550411 DENND3A2RUS2 1198 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 TMEM221A6NGB7 291 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 POTEMA6NI47 508 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 TBKBP1A7MCY6 615 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 M0R296 226 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 PER2O15055 1255 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 MGEA5O60502 916 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 CCNT1O60563 726 aaKnown RBP7.71□□□□□ -1.18
CBX5-204ENST00000550411 GPR32O75388 356 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 VTNP04004 478 aa7.71□□□□□ -1.18
CBX5-204ENST00000550411 ATF7P17544 494 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms