RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 PGBD4Q96DM1 585 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 CDK5RAP3Q96JB5 506 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 TRAIPQ9BWF2 469 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 TMEM117Q9H0C3 514 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 LMAN2LQ9H0V9 348 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 POLR3FQ9H1D9 316 aaPredicted RBP7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 XPNPEP1Q9NQW7 623 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 FOXD4L1Q9NU39 408 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 AGPAT5Q9NUQ2 364 aa7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 DDX19AQ9NUU7 478 aaKnown RBP7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 TYW1Q9NV66 732 aaKnown RBP7.12□□□□□ -1.27
TMEM106C-213ENST00000550146 CHD7Q9P2D1 2997 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 LRRIQ4A6NIV6 560 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 PP2D1A8MPX8 630 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 GRM6O15303 877 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 LAG3P18627 525 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 CYP11B2P19099 503 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 SYT1P21579 422 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 GLRA2P23416 452 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 AXLP30530 894 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 UBA7P41226 1012 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 MRPS5P82675 430 aaKnown RBP7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 CAPSQ13938 189 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 PPP2R5AQ15172 486 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 IL17AQ16552 155 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 TMEM132AQ24JP5 1023 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 GLB1LQ6UWU2 654 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 ZBTB8OSQ8IWT0 167 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 THNSL1Q8IYQ7 743 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 HACE1Q8IYU2 909 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 LRRC43Q8N309 656 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 KCTD17Q8N5Z5 321 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 KLHL23Q8NBE8 558 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 CNNM3Q8NE01 707 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 RASSF8Q8NHQ8 419 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 HELQQ8TDG4 1101 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 ASAP3Q8TDY4 903 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 RSPH1Q8WYR4 309 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 SYMPKQ92797 1274 aaKnown RBP7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 HLA-CQ95604 372 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 SNX21Q969T3 373 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 IFT74Q96LB3 600 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 AK8Q96MA6 479 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 ZNF558Q96NG5 402 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 MRPL9Q9BYD2 267 aaKnown RBP7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 NFKBIZQ9BYH8 718 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 C2orf40Q9H1Z8 148 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 BHMT2Q9H2M3 363 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 MINDY3Q9H8M7 445 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 ALG13Q9NP73 1137 aaKnown RBP7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 GPRC5CQ9NQ84 441 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 PRDM6Q9NQX0 595 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 FAM105AQ9NUU6 356 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 PUF60Q9UHX1 559 aaKnown RBP7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 COG5Q9UP83 839 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 PCDHB2Q9Y5E7 798 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 MYH11P35749 1972 aa7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
TMEM106C-213ENST00000550146 E9PMD0 336 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 DLL1O00548 723 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 NCK2O43639 380 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 TSPAN1O60635 241 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 ZNF623O75123 536 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 FGF18O76093 207 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 EYA4O95677 639 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 SSBP05455 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 LINC00271P0C7V0 271 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 CDC25AP30304 524 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 HOXA11P31270 313 aaPredicted RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 LONP1P36776 959 aaKnown RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 KRT17Q04695 432 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 UBE3AQ05086 875 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 RNASELQ05823 741 aaKnown RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 MBTD1Q05BQ5 628 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 SF3A1Q15459 793 aaKnown RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 ECM1Q16610 540 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 LONRF3Q496Y0 759 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 TJAP1Q5JTD0 557 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 CLLU1OSQ5K130 101 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 NOTUMQ6P988 496 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 ZNF598Q86UK7 904 aaKnown RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 CABP7Q86V35 215 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 IFNLR1Q8IU57 520 aaPredicted RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 COLGALT1Q8NBJ5 622 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 DEPTORQ8TB45 409 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 URGCPQ8TCY9 931 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 MICAL1Q8TDZ2 1067 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 KIFAP3Q92845 792 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 LPPQ93052 612 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 PPP2R3CQ969Q6 453 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 CCDC51Q96ER9 411 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 CALML4Q96GE6 196 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 CASD1Q96PB1 797 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 ASB2Q96Q27 587 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 TRIM6Q9C030 488 aaPredicted RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 NT5C3AQ9H0P0 336 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 ZSCAN16Q9H4T2 348 aaPredicted RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 UBN1Q9NPG3 1134 aa7.1□□□□□ -1.27
TMEM106C-213ENST00000550146 PRMT7Q9NVM4 692 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms