RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 K7ELQ4 463 aaPredicted RBP10.87□□□□□ -0.67
HDAC7-229ENST00000549883 TSPAN1O60635 241 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 EDN1P05305 212 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 XRCC6P12956 609 aaKnown RBP eCLIP10.87□□□□□ -0.676e-6■■■■■ 31.4
HDAC7-229ENST00000549883 SYT1P21579 422 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 PRPHP41219 470 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 CDC42EP1Q00587 391 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 MBTD1Q05BQ5 628 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 AMHR2Q16671 573 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 RILPL1Q5EBL4 403 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 SRGAP1Q7Z6B7 1085 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 ADGRD2Q7Z7M1 963 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 COLGALT1Q8NBJ5 622 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 ERMNQ8TAM6 284 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 LRRC15Q8TF66 581 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 CCDC43Q96MW1 224 aaKnown RBP10.87□□□□□ -0.67
HDAC7-229ENST00000549883 NECAB3Q96P71 396 aaPredicted RBP10.87□□□□□ -0.67
HDAC7-229ENST00000549883 PNMA5Q96PV4 448 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 ASB2Q96Q27 587 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 C11orf84Q9BUA3 381 aaPredicted RBP10.87□□□□□ -0.67
HDAC7-229ENST00000549883 KIFC3Q9BVG8 833 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
HDAC7-229ENST00000549883 TMEM117Q9H0C3 514 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 BHMT2Q9H2M3 363 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 CHST12Q9NRB3 414 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 MYH15Q9Y2K3 1946 aa10.87□□□□□ -0.67
HDAC7-229ENST00000549883 TRIP11Q15643 1979 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 TDRD15B5MCY1 1934 aaKnown RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 ARHGEF35A5YM69 484 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 LRRIQ4A6NIV6 560 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 NT5C1B-RDH14C9J2C7 533 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 INO80B-WBP1J3KQ70 363 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 ASAP2O43150 1006 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 GAS2O43903 313 aaKnown RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 RB1P06400 928 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 CYP11B2P19099 503 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 RESTQ13127 1097 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 PDIA5Q14554 519 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 MXD4Q14582 209 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 ZRSR1Q15695 479 aaKnown RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 SPOUT1Q5T280 376 aaKnown RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 DTHD1Q6ZMT9 781 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 AGMOQ6ZNB7 445 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 EXOC8Q8IYI6 725 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 SMG8Q8ND04 991 aaKnown RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 RUSC1Q9BVN2 902 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 PLVAPQ9BX97 442 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 INO80BQ9C086 356 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-229ENST00000549883 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 DACT1Q9NYF0 836 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 INPP5FQ9Y2H2 1132 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 HES2Q9Y543 173 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 PCDHB2Q9Y5E7 798 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 CLIC4Q9Y696 253 aa10.86□□□□□ -0.67
HDAC7-229ENST00000549883 LAD1O00515 517 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 LINC01565O15544 149 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 OFD1O75665 1012 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 FGF18O76093 207 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 EOMESO95936 686 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 ARF4P18085 180 aaPredicted RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 ERVFC1P60507 584 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 RBM10P98175 930 aaKnown RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 DLX2Q07687 328 aaPredicted RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 HYAL1Q12794 435 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 SF3A1Q15459 793 aaKnown RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 HAUS3Q68CZ6 603 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 TMEM173Q86WV6 379 aaPredicted RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 DAW1Q8N136 415 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 BCL7CQ8WUZ0 217 aaPredicted RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 POF1BQ8WVV4 589 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 ATXN2LQ8WWM7 1075 aaKnown RBP10.85□□□□□ -0.67
HDAC7-229ENST00000549883 P2RX5Q93086 422 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 HLA-CQ95604 372 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 MTMR6Q9Y217 621 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 RWDD3Q9Y3V2 267 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 XIRP2A4UGR9 3374 aa10.85□□□□□ -0.67
HDAC7-229ENST00000549883 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.84□□□□□ -0.67
HDAC7-229ENST00000549883 SFI1A8K8P3 1242 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 ZNF623O75123 536 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 ERLIN2O94905 339 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 EYA4O95677 639 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 BMP1P13497 986 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 LIG1P18858 919 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 KCNA5P22460 613 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 LTBRP36941 435 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 CEBPZQ03701 1054 aaKnown RBP10.84□□□□□ -0.67
HDAC7-229ENST00000549883 RAD51AP2Q09MP3 1159 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 MAPK7Q13164 816 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 TFDP1Q14186 410 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 PTPAQ15257 358 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 PTPROQ16827 1216 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 TJAP1Q5JTD0 557 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 KRT79Q5XKE5 535 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 KCNT2Q6UVM3 1135 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 USP49Q70CQ1 688 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 MRPL10Q7Z7H8 261 aaKnown RBP10.84□□□□□ -0.67
HDAC7-229ENST00000549883 ZNF280BQ86YH2 543 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms