RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 TUFT1Q9NNX1 390 aa20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 XPNPEP1Q9NQW7 623 aa20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 BMP2KQ9NSY1 1161 aaPredicted RBP20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 PLXNA4Q9HCM2 1894 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 CARNS1A5YM72 827 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 POTEMA6NI47 508 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 CSPG5O95196 566 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 SPATA31C1P0DKV0 1188 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 IL9P15248 144 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 GTF2F1P35269 517 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 RARRES1P49788 294 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 GNL2Q13823 731 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 EFHBQ8N7U6 833 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 HELQQ8TDG4 1101 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 MRPS27Q92552 414 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 CCDC43Q96MW1 224 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 MINDY3Q9H8M7 445 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 SPG21Q9NZD8 308 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 KIF3AQ9Y496 699 aa20.77■□□□□ 0.92
CHMP1A-207ENST00000549328 ARID2Q68CP9 1835 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 FSD2A1L4K1 749 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 OR52Z1P0C646 297 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 U2AF2P26368 475 aaKnown RBP eCLIP20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 HOXA11P31270 313 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 PTENP60484 403 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 KRT17Q04695 432 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 DLX2Q07687 328 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 TFDP1Q14186 410 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 ZNF174Q15697 407 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 TTC38Q5R3I4 469 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 GLB1LQ6UWU2 654 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 ADGRD2Q7Z7M1 963 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 CATSPER3Q86XQ3 398 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 IFNLR1Q8IU57 520 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 PIGOQ8TEQ8 1089 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 PGBD4Q96DM1 585 aa20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 POLR3CQ9BUI4 534 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 NOL7Q9UMY1 257 aaKnown RBP20.76■□□□□ 0.91
CHMP1A-207ENST00000549328 FSCN2O14926 492 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 ARL2P36404 184 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 TECP42680 631 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 NRIP1P48552 1158 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 ERVFC1P60507 584 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 MRPL10Q7Z7H8 261 aaKnown RBP20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 ERMNQ8TAM6 284 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 NACC1Q96RE7 527 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 CDCA3Q99618 268 aaPredicted RBP20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 TLE6Q9H808 572 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 PRKAG3Q9UGI9 489 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 DBR1Q9UK59 544 aaKnown RBP20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 PCDHB2Q9Y5E7 798 aa20.75■□□□□ 0.91
CHMP1A-207ENST00000549328 LINC01565O15544 149 aa20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 TBX10O75333 385 aa20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 MUTP22033 750 aa20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 RPA1P27694 616 aa20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 AXLP30530 894 aa20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 ALDH7A1P49419 539 aaKnown RBP20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 NFKBIZQ9BYH8 718 aa20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 NGRNQ9NPE2 291 aaKnown RBP20.74■□□□□ 0.91
CHMP1A-207ENST00000549328 MED24O75448 989 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 OFD1O75665 1012 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 ERLIN2O94905 339 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 NDUFV1P49821 464 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 NCBP1Q09161 790 aaKnown RBP20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 NOMO2Q5JPE7 1267 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 RBM23Q86U06 439 aaKnown RBP20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 GJD3Q8N144 294 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 SLC39A11Q8N1S5 342 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 C4orf32Q8N8J7 132 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 CNNM3Q8NE01 707 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 LPPQ93052 612 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 MSLNLQ96KJ4 702 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 C1QTNF1Q9BXJ1 281 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 CD320Q9NPF0 282 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 CD207Q9UJ71 328 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 PCDHGC5Q9Y5F6 944 aa20.73■□□□□ 0.91
CHMP1A-207ENST00000549328 MBTPS2O43462 519 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 EYA4O95677 639 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 PBX3P40426 434 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 MCM2P49736 904 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 FXR2P51116 673 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 BCAR1P56945 870 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 SMAD4Q13485 552 aaKnown RBP20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 CAPSQ13938 189 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 SMAD2Q15796 467 aaKnown RBP20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 UBXN11Q5T124 520 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 AGMOQ6ZNB7 445 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 MCPH1Q8NEM0 835 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 ASAP3Q8TDY4 903 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 CCDC51Q96ER9 411 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 TMX3Q96JJ7 454 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 TCF25Q9BQ70 676 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 TBC1D13Q9NVG8 400 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 CLEC1BQ9P126 229 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 CNTNAP2Q9UHC6 1331 aa20.72■□□□□ 0.91
CHMP1A-207ENST00000549328 A0A087WWV3 80 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 MEIS3P2A8K0S8 358 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 INO80B-WBP1J3KQ70 363 aa20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 USO1O60763 962 aaKnown RBP20.71■□□□□ 0.91
CHMP1A-207ENST00000549328 GLRA2P23416 452 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms