RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 CCDC12Q8WUD4 166 aaPredicted RBP9.6□□□□□ -0.87
TROAP-208ENST00000548817 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
TROAP-208ENST00000548817 PGBD1Q96JS3 809 aa9.6□□□□□ -0.87
TROAP-208ENST00000548817 CASD1Q96PB1 797 aa9.6□□□□□ -0.87
TROAP-208ENST00000548817 ZBP1Q9H171 429 aa9.6□□□□□ -0.87
TROAP-208ENST00000548817 PARD6AQ9NPB6 346 aa9.6□□□□□ -0.87
TROAP-208ENST00000548817 SPATA6Q9NWH7 488 aaPredicted RBP9.6□□□□□ -0.87
TROAP-208ENST00000548817 STK39Q9UEW8 545 aa9.6□□□□□ -0.87
TROAP-208ENST00000548817 COL1A2P08123 1366 aa9.6□□□□□ -0.87
TROAP-208ENST00000548817 MYH9P35579 1960 aaKnown RBP9.59□□□□□ -0.87
TROAP-208ENST00000548817 C2orf16Q68DN1 1984 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 CCDC196A0A1B0GTZ2 297 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 GOLGA8AA7E2F4 631 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 GOLGA8BA8MQT2 603 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 ATG7O95352 703 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 CTSAP10619 480 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 FGFR1P11362 822 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 GLULP15104 373 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 TMOD1P28289 359 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 AKAP17AQ02040 695 aaKnown RBP9.59□□□□□ -0.87
TROAP-208ENST00000548817 ITGB3BPQ13352 177 aaPredicted RBP9.59□□□□□ -0.87
TROAP-208ENST00000548817 KRT32Q14532 448 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 NECTIN1Q15223 517 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 PTPN14Q15678 1187 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 LAIR1Q6GTX8 287 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 SWSAP1Q6NVH7 229 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 ELMSAN1Q6PJG2 1045 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 APOA5Q6Q788 366 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 ABHD15Q6UXT9 468 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 LRRC55Q6ZSA7 311 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
TROAP-208ENST00000548817 MRPL9Q9BYD2 267 aaKnown RBP9.59□□□□□ -0.87
TROAP-208ENST00000548817 C6orf50Q9HD87 102 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 TBC1D22BQ9NU19 505 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 BARHL2Q9NY43 387 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 DPP7Q9UHL4 492 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 ST3GAL5Q9UNP4 418 aa9.59□□□□□ -0.87
TROAP-208ENST00000548817 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
TROAP-208ENST00000548817 CNTNAP5Q8WYK1 1306 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 KLF18A0A0U1RQI7 1052 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 SPDYE4A6NLX3 237 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 IPO5O00410 1097 aaKnown RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 MAGEB2O15479 319 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 PSAPP07602 524 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 HMGB1P09429 215 aaKnown RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 ZSCAN20P17040 1043 aaPredicted RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 GBP2P32456 591 aaPredicted RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 CA8P35219 290 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 SREBF1P36956 1147 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 ALDH7A1P49419 539 aaKnown RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 CRYBB1P53674 252 aaPredicted RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 PRKCQQ04759 706 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 RSPO2Q6UXX9 243 aaPredicted RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 TRMT1LQ7Z2T5 733 aaKnown RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 KIAA0319LQ8IZA0 1049 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 VPS52Q8N1B4 723 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 MAP7D2Q96T17 732 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 ZNF577Q9BSK1 485 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 DDX23Q9BUQ8 820 aaKnown RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 FOXQ1Q9C009 403 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 WDR6Q9NNW5 1121 aaKnown RBP9.58□□□□□ -0.88
TROAP-208ENST00000548817 NRBP2Q9NSY0 501 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 RAB23Q9ULC3 237 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 CEP131Q9UPN4 1083 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 SAMM50Q9Y512 469 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 DOCK8Q8NF50 2099 aa9.58□□□□□ -0.88
TROAP-208ENST00000548817 IGKV6D-21A0A0A0MT36 114 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 KANSL1LA0AUZ9 987 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 N4BP1O75113 896 aaKnown RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 RETP07949 1114 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 GNA11P29992 359 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 PBX3P40426 434 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 SETQ01105 290 aaPredicted RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 CSTF1Q05048 431 aaKnown RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 DSC3Q14574 896 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 KIZQ2M2Z5 673 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 ZNF746Q6NUN9 644 aaPredicted RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 DDX53Q86TM3 631 aaKnown RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 CCDC60Q8IWA6 550 aaPredicted RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 KDF1Q8NAX2 398 aaPredicted RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 BICD2Q8TD16 824 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 RSAD2Q8WXG1 361 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 SCLT1Q96NL6 688 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 PPP1R16BQ96T49 567 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 OSMRQ99650 979 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 EMILIN2Q9BXX0 1053 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 RNF19AQ9NV58 838 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.57□□□□□ -0.88
TROAP-208ENST00000548817 AKT3Q9Y243 479 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 PCDHA10Q9Y5I2 948 aa9.57□□□□□ -0.88
TROAP-208ENST00000548817 ZFP37Q9Y6Q3 630 aaPredicted RBP9.57□□□□□ -0.88
TROAP-208ENST00000548817 DSPP15924 2871 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms