RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SLC22A17Q8WUG5 538 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 SNX27Q96L92 541 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 NLRP4Q96MN2 994 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 FAM105AQ9NUU6 356 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 SUCLA2Q9P2R7 463 aaPredicted RBP18.51■□□□□ 0.55
SSH1-208ENST00000548522 LIMD1Q9UGP4 676 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 PLXNA3P51805 1871 aa18.51■□□□□ 0.55
SSH1-208ENST00000548522 GALTP07902 379 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 SFPQP23246 707 aaKnown RBP eCLIP18.5■□□□□ 0.55
SSH1-208ENST00000548522 PDIA3P30101 505 aaKnown RBP18.5■□□□□ 0.55
SSH1-208ENST00000548522 NLRP5P59047 1200 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 PTPN14Q15678 1187 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 Q4G0T1 1027 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 NOMO2Q5JPE7 1267 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 GLB1LQ6UWU2 654 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 ANO5Q75V66 913 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 DDX53Q86TM3 631 aaKnown RBP18.5■□□□□ 0.55
SSH1-208ENST00000548522 ZNF280BQ86YH2 543 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 ETNPPLQ8TBG4 499 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 AIFM3Q96NN9 605 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 TRAIPQ9BWF2 469 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 CHST12Q9NRB3 414 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 DZANK1Q9NVP4 752 aa18.5■□□□□ 0.55
SSH1-208ENST00000548522 DBR1Q9UK59 544 aaKnown RBP18.5■□□□□ 0.55
SSH1-208ENST00000548522 MAFO75444 373 aaPredicted RBP18.49■□□□□ 0.55
SSH1-208ENST00000548522 OFD1O75665 1012 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 NPY5RQ15761 445 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 ASCL5Q7RTU5 278 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 CATSPER4Q7RTX7 472 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 ZNF579Q8NAF0 562 aaKnown RBP18.49■□□□□ 0.55
SSH1-208ENST00000548522 RDM1Q8NG50 284 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 PCDHA4Q9UN74 947 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 IRAK3Q9Y616 596 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 DCHS1Q96JQ0 3298 aa18.49■□□□□ 0.55
SSH1-208ENST00000548522 SPTBN4Q9H254 2564 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 CYP3A7-CYP3A51PA0A087WV96 503 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 DDX11L8A8MPP1 907 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 M0R2N6 131 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 EML1O00423 815 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 SLC37A4O43826 429 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
SSH1-208ENST00000548522 CYP3A7P24462 503 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 POLGP54098 1239 aaPredicted RBP18.48■□□□□ 0.55
SSH1-208ENST00000548522 RNASELQ05823 741 aaKnown RBP18.48■□□□□ 0.55
SSH1-208ENST00000548522 AGMOQ6ZNB7 445 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 CABP7Q86V35 215 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 ZNF410Q86VK4 478 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 ZDHHC14Q8IZN3 488 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 MBOAT7Q96N66 472 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
SSH1-208ENST00000548522 MINDY3Q9H8M7 445 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 IFT122Q9HBG6 1241 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 BMP2KQ9NSY1 1161 aaPredicted RBP18.48■□□□□ 0.55
SSH1-208ENST00000548522 WRAP73Q9P2S5 460 aaPredicted RBP18.48■□□□□ 0.55
SSH1-208ENST00000548522 RBM19Q9Y4C8 960 aaKnown RBP18.48■□□□□ 0.55
SSH1-208ENST00000548522 WDR87Q6ZQQ6 2873 aa18.48■□□□□ 0.55
SSH1-208ENST00000548522 DDHD2O94830 711 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 DNM2P50570 870 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 NPEPPSP55786 919 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 TOB2Q14106 344 aaPredicted RBP18.47■□□□□ 0.55
SSH1-208ENST00000548522 ATAT1Q5SQI0 421 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 CWF19L1Q69YN2 538 aaKnown RBP18.47■□□□□ 0.55
SSH1-208ENST00000548522 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 SH3GLB2Q9NR46 395 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 AGPAT5Q9NUQ2 364 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 PCDHB2Q9Y5E7 798 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 DENND4AQ7Z401 1863 aa18.47■□□□□ 0.55
SSH1-208ENST00000548522 RIF1Q5UIP0 2472 aaKnown RBP18.47■□□□□ 0.55
SSH1-208ENST00000548522 DTNBO60941 627 aa18.46■□□□□ 0.55
SSH1-208ENST00000548522 ZNF623O75123 536 aa18.46■□□□□ 0.55
SSH1-208ENST00000548522 EVCP57679 992 aa18.46■□□□□ 0.55
SSH1-208ENST00000548522 BMS1Q14692 1282 aaKnown RBP18.46■□□□□ 0.55
SSH1-208ENST00000548522 BLIDQ8IZY5 108 aa18.46■□□□□ 0.55
SSH1-208ENST00000548522 VAV3Q9UKW4 847 aa18.46■□□□□ 0.55
SSH1-208ENST00000548522 USTQ9Y2C2 406 aa18.46■□□□□ 0.55
SSH1-208ENST00000548522 PTPRZ1P23471 2315 aaPredicted RBP18.45■□□□□ 0.54
SSH1-208ENST00000548522 MYO10Q9HD67 2058 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 PROB1E7EW31 1015 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 CNPP09543 421 aaKnown RBP18.45■□□□□ 0.54
SSH1-208ENST00000548522 RAB27AP51159 221 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 CLCN4P51793 760 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 CDC42EP1Q00587 391 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 INF2Q27J81 1249 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 UBXN11Q5T124 520 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 ASTLQ6HA08 431 aaPredicted RBP18.45■□□□□ 0.54
SSH1-208ENST00000548522 GPR149Q86SP6 731 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 TMEM143Q96AN5 459 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 KLHL5Q96PQ7 755 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 IRF2BPLQ9H1B7 796 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 SFXN1Q9H9B4 322 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 CYP26B1Q9NR63 512 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 DDX25Q9UHL0 483 aaKnown RBP18.45■□□□□ 0.54
SSH1-208ENST00000548522 COL4A3BPQ9Y5P4 624 aa18.45■□□□□ 0.54
SSH1-208ENST00000548522 GVINP1Q7Z2Y8 2422 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 PRR23AA6NEV1 266 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 POMCP01189 267 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 MYBP10242 640 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 SKIP12755 728 aa18.44■□□□□ 0.54
SSH1-208ENST00000548522 HOXA11P31270 313 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms