RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 KMT5BQ4FZB7 885 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 PLEKHG4Q58EX7 1191 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 CNKSR3Q6P9H4 555 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 TMCO2Q7Z6W1 182 aaPredicted RBP19.21■□□□□ 0.67
HDAC7-227ENST00000548080 GPBP1Q86WP2 473 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 NLRP7Q8WX94 980 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 HERVK_113Q902F9 699 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 DDX12PQ92771 950 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 IFIH1Q9BYX4 1025 aaKnown RBP19.21■□□□□ 0.67
HDAC7-227ENST00000548080 BHMT2Q9H2M3 363 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 GPRC5CQ9NQ84 441 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 NOC2LQ9Y3T9 749 aaKnown RBP19.21■□□□□ 0.67
HDAC7-227ENST00000548080 MICAL3Q7RTP6 2002 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 PVALEFA0A1B0GWK0 134 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 RHOBTB3O94955 611 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 PARNO95453 639 aaKnown RBP19.2■□□□□ 0.66
HDAC7-227ENST00000548080 PFKMP08237 780 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 FGFR4P22455 802 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 DNM2P50570 870 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 GPC3P51654 580 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 CT47A1Q5JQC4 288 aaPredicted RBP19.2■□□□□ 0.66
HDAC7-227ENST00000548080 LUZP1Q86V48 1076 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 NLRP4Q96MN2 994 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 GTPBP4Q9BZE4 634 aaKnown RBP19.2■□□□□ 0.66
HDAC7-227ENST00000548080 ADAMTS10Q9H324 1103 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 ATP6V0A4Q9HBG4 840 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 EXOC1Q9NV70 894 aa19.2■□□□□ 0.66
HDAC7-227ENST00000548080 DBR1Q9UK59 544 aaKnown RBP19.2■□□□□ 0.66
HDAC7-227ENST00000548080 A0A087WZ62 844 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 BECN2A8MW95 431 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 ACTN1P12814 892 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 CYP11B2P19099 503 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 ZNF658Q5TYW1 1059 aaPredicted RBP19.19■□□□□ 0.66
HDAC7-227ENST00000548080 PADI6Q6TGC4 694 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 TSHZ1Q6ZSZ6 1077 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 UNC13DQ70J99 1090 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 DYMQ7RTS9 669 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 ASAP3Q8TDY4 903 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 PRPF31Q8WWY3 499 aaKnown RBP19.19■□□□□ 0.66
HDAC7-227ENST00000548080 SEPT8Q92599 483 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 DNAJC19Q96DA6 116 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 FDXACB1Q9BRP7 624 aaPredicted RBP19.19■□□□□ 0.66
HDAC7-227ENST00000548080 GBF1Q92538 1859 aa19.19■□□□□ 0.66
HDAC7-227ENST00000548080 SMTNL1A8MU46 457 aa19.18■□□□□ 0.66
HDAC7-227ENST00000548080 GOLGA6L19H0YKK7 550 aa19.18■□□□□ 0.66
HDAC7-227ENST00000548080 IBSPP21815 317 aaPredicted RBP19.18■□□□□ 0.66
HDAC7-227ENST00000548080 CRYBB1P53674 252 aaPredicted RBP19.18■□□□□ 0.66
HDAC7-227ENST00000548080 DEFB103AP81534 67 aa19.18■□□□□ 0.66
HDAC7-227ENST00000548080 NFX1Q12986 1120 aaKnown RBP19.18■□□□□ 0.66
HDAC7-227ENST00000548080 RASIP1Q5U651 963 aa19.18■□□□□ 0.66
HDAC7-227ENST00000548080 DHX40Q8IX18 779 aaKnown RBP19.18■□□□□ 0.66
HDAC7-227ENST00000548080 JPH2Q9BR39 696 aaPredicted RBP19.18■□□□□ 0.66
HDAC7-227ENST00000548080 POLR3FQ9H1D9 316 aaPredicted RBP19.18■□□□□ 0.66
HDAC7-227ENST00000548080 PADI3Q9ULW8 664 aa19.18■□□□□ 0.66
HDAC7-227ENST00000548080 PPME1Q9Y570 386 aa19.18■□□□□ 0.66
HDAC7-227ENST00000548080 COL4A3BPQ9Y5P4 624 aa19.18■□□□□ 0.66
HDAC7-227ENST00000548080 A0A1W2PPC1 479 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 DGAT1O75907 488 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 RPLP2P05387 115 aaKnown RBP19.17■□□□□ 0.66
HDAC7-227ENST00000548080 SRGAP2CP0DJJ0 459 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 WDR5P61964 334 aaKnown RBP19.17■□□□□ 0.66
HDAC7-227ENST00000548080 LAMTOR4Q0VGL1 99 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 PAK2Q13177 524 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 ARSHQ5FYA8 562 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 FAM102BQ5T8I3 360 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.17■□□□□ 0.66
HDAC7-227ENST00000548080 FAM228AQ86W67 206 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 AOPEPQ8N6M6 819 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 PSPC1Q8WXF1 523 aaKnown RBP19.17■□□□□ 0.66
HDAC7-227ENST00000548080 LRCH3Q96II8 777 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 RUSC1Q9BVN2 902 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 SLC4A7Q9Y6M7 1214 aa19.17■□□□□ 0.66
HDAC7-227ENST00000548080 PPP1R3GB7ZBB8 358 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 IKBKBO14920 756 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 RPS6KA5O75582 802 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 KRT18P05783 430 aaKnown RBP19.16■□□□□ 0.66
HDAC7-227ENST00000548080 IDEP14735 1019 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 ERCC5P28715 1186 aaPredicted RBP19.16■□□□□ 0.66
HDAC7-227ENST00000548080 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 IKBKEQ14164 716 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 FAM117BQ6P1L5 589 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 LINC01599Q8WXQ3 324 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 CD44P16070 742 aaKnown RBP19.16■□□□□ 0.66
HDAC7-227ENST00000548080 KCNJ6P48051 423 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 RABGGTBP53611 331 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 RINT1Q6NUQ1 792 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 CCDC65Q8IXS2 484 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 EXOC8Q8IYI6 725 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 SMYD4Q8IYR2 804 aaPredicted RBP19.16■□□□□ 0.66
HDAC7-227ENST00000548080 TCP11Q8WWU5 503 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 ANP32BQ92688 251 aaKnown RBP19.16■□□□□ 0.66
HDAC7-227ENST00000548080 MTIF3Q9H2K0 278 aaKnown RBP19.16■□□□□ 0.66
HDAC7-227ENST00000548080 ERVK-5Q9HDB9 667 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 PANK4Q9NVE7 773 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 ST3GAL5Q9UNP4 418 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 GDAQ9Y2T3 454 aa19.16■□□□□ 0.66
HDAC7-227ENST00000548080 NPHP3-ACAD11A0A0J9YXS1 232 aa19.15■□□□□ 0.66
HDAC7-227ENST00000548080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.15■□□□□ 0.66
HDAC7-227ENST00000548080 MGEA5O60502 916 aa19.15■□□□□ 0.66
HDAC7-227ENST00000548080 DARSP14868 501 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms