RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 FAM204AQ9H8W3 233 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 USP40Q9NVE5 1235 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 SUGT1Q9Y2Z0 365 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 HYOU1Q9Y4L1 999 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 PCDHA13Q9Y5I0 950 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 CAPN6Q9Y6Q1 641 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 ATP8B3O60423 1300 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 KDM3AQ9Y4C1 1321 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 IGKV6D-41A0A0C4DH26 115 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 DDTLA6NHG4 134 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 PDE2AO00408 941 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 GNA14O95837 355 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 GOLGA8HP0CJ92 632 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 PYGBP11216 843 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 VCAM1P19320 739 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 CLK2P49760 499 aaKnown RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 ADCY7P51828 1080 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 GABPAQ06546 454 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 NNTQ13423 1086 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 MKRN4PQ13434 485 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 SHHQ15465 462 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 CCDC38Q502W7 563 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 GLE1Q53GS7 698 aaKnown RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 EMBQ6PCB8 327 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 FOXR1Q6PIV2 292 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 MAPKAPK5Q8IW41 473 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 ZC3H3Q8IXZ2 948 aaKnown RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 B4GALNT2Q8NHY0 566 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 CAGE1Q8TC20 777 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 AFAP1L1Q8TED9 768 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 PIGSQ96S52 555 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 PLIN2Q99541 437 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 NAP1L4Q99733 375 aaKnown RBP9.45□□□□□ -0.9
TMEM116-205ENST00000547878 LOC285556D6RIA3 1793 aa9.45□□□□□ -0.9
TMEM116-205ENST00000547878 MACROD2A1Z1Q3 448 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 A6NNZ2 444 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 EBAG9O00559 213 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 SRGAP2O75044 1071 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 PYGLP06737 847 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 VDRP11473 427 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 FERP16591 822 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 SLC8A1P32418 973 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 FNTAP49354 379 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 MAP3K10Q02779 954 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 IFT88Q13099 833 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 CCL14Q16627 93 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 TUBB8Q3ZCM7 444 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 KRT79Q5XKE5 535 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 PDXDC1Q6P996 788 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 MICALCLQ6ZW33 695 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 ARHGAP22Q7Z5H3 698 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 YTHDF3Q7Z739 585 aaKnown RBP9.44□□□□□ -0.9
TMEM116-205ENST00000547878 CACTIN-AS1Q8N1I8 211 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 SPATA4Q8NEY3 305 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 CDK5RAP3Q96JB5 506 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
TMEM116-205ENST00000547878 TSG101Q99816 390 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 SH3GL2Q99962 352 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 JADE2Q9NQC1 790 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 MTMR4Q9NYA4 1195 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 CEP72Q9P209 647 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 TFR2Q9UP52 801 aa9.44□□□□□ -0.9
TMEM116-205ENST00000547878 FRMPD3Q5JV73 1810 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 LRRC53A6NM62 1247 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 FAM196BA6NMK8 535 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 TNFRSF10AO00220 468 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 EPHB6O15197 1021 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 SLC37A4O43826 429 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 EDIL3O43854 480 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 E2F6O75461 281 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 FAM200BP0CF97 657 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 EPB41P11171 864 aaKnown RBP9.43□□□□□ -0.9
TMEM116-205ENST00000547878 FOSL2P15408 326 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 ZNF24P17028 368 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 PLA2G5P39877 138 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 TRPC1P48995 793 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 SMTNP53814 917 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 SESN3P58005 492 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 FKBP3Q00688 224 aaKnown RBP9.43□□□□□ -0.9
TMEM116-205ENST00000547878 CYP27A1Q02318 531 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 CCDC15Q0P6D6 951 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 FBXW10Q5XX13 1052 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 HGSNATQ68CP4 663 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 SLC30A9Q6PML9 568 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
TMEM116-205ENST00000547878 DNAJC19Q96DA6 116 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 CAPZA3Q96KX2 299 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 LBHD1Q9BQE6 289 aaPredicted RBP9.43□□□□□ -0.9
TMEM116-205ENST00000547878 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 GLT8D2Q9H1C3 349 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 ASCC2Q9H1I8 757 aaPredicted RBP9.43□□□□□ -0.9
TMEM116-205ENST00000547878 UNC45AQ9H3U1 944 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms