RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 KDM5CP41229 1560 aa3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 CLTCQ00610 1675 aaKnown RBP3.71□□□□□ -1.82
DEPDC4-204ENST00000547823 KLRG2A4D1S0 409 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 GOLGA8BA8MQT2 603 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 KRTAP29-1A8MX34 341 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 TRIM24O15164 1050 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 FOXP2O15409 715 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 RECQL4O94761 1208 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 MMEP08473 750 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 PYGMP11217 842 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 ITGB6P18564 788 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 KRT15P19012 456 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 SDHAP31040 664 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 ETFBP38117 255 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 PRELPP51888 382 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 RABGGTBP53611 331 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 SUMO1P63165 101 aaKnown RBP3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 ADAM15Q13444 863 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 SAFB2Q14151 953 aaKnown RBP eCLIP3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 FKBP15Q5T1M5 1219 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 HECTD2Q5U5R9 776 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 LRSAM1Q6UWE0 723 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 OSTM1Q86WC4 334 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 FAM9AQ8IZU1 332 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 PCDH19Q8TAB3 1148 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 ASB15Q8WXK1 588 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 BBC3Q96PG8 261 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 CYP4F11Q9HBI6 524 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 IL23AQ9NPF7 189 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 COX11Q9Y6N1 276 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 ZNF518AQ6AHZ1 1483 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 MYO5CQ9NQX4 1742 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 FAM135BQ49AJ0 1406 aa3.7□□□□□ -1.82
DEPDC4-204ENST00000547823 A2ML1A8K2U0 1454 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 CDK12Q9NYV4 1490 aaPredicted RBP3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 GRID2IPA4D2P6 1211 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 PLEKHD1A6NEE1 506 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 FAM20BO75063 409 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 JAM2P57087 298 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 BPIFB4P59827 614 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 ATP2C1P98194 919 aaPredicted RBP3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 GUCY1A3Q02108 690 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 PLEKHG4Q58EX7 1191 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 COLEC12Q5KU26 742 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 MEX3CQ5U5Q3 659 aaKnown RBP3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 MDGA1Q8NFP4 955 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 GPR150Q8NGU9 434 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 ATXN2LQ8WWM7 1075 aaKnown RBP3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 GBP4Q96PP9 640 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 MNTQ99583 582 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 FOXB1Q99853 325 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 ZNF408Q9H9D4 720 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 RCAN3Q9UKA8 241 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 CBLCQ9ULV8 474 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 HS3ST4Q9Y661 456 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 PLCH2O75038 1416 aa3.69□□□□□ -1.82
DEPDC4-204ENST00000547823 IQGAP1P46940 1657 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 ROBO1Q9Y6N7 1651 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 MED14O60244 1454 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 NUP153P49790 1475 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 MLH3Q9UHC1 1453 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 PHLPP1O60346 1717 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 CCDC66A2RUB6 948 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 PRAMEF22A3QJZ6 481 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 BLACEA4D250 179 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 HIP1RO75146 1068 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 ERBB2P04626 1255 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 JUNP05412 331 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 VSIG10L2P0DP72 767 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 GYPEP15421 78 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 TCF3P15923 654 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 AVPR1BP47901 424 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 RBM25P49756 843 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 USP14P54578 494 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 GABREP78334 506 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 TCIRG1Q13488 830 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 ERCC6LQ2NKX8 1250 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 TIGD2Q4W5G0 525 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 AFAP1Q8N556 730 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 ANKRD53Q8N9V6 530 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 ARL8AQ96BM9 186 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 GPHA2Q96T91 129 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 SMURF1Q9HCE7 757 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 DENND2AQ9ULE3 1009 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 TRAF6Q9Y4K3 522 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 DEPDC5O75140 1603 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 CDK13Q14004 1512 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 KIDINS220Q9ULH0 1771 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 NPHP4O75161 1426 aaPredicted RBP3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 ITSN2Q9NZM3 1697 aa3.68□□□□□ -1.82
DEPDC4-204ENST00000547823 UBE2QL1A1L167 161 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 GOLGA6L22H0YM25 854 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 FGRP09769 529 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 LAG3P18627 525 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 GNAT2P19087 354 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 ALDH6A1Q02252 535 aaKnown RBP3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 DGKDQ16760 1214 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 METTL24Q5JXM2 366 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 EFCAB2Q5VUJ9 269 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 KRT40Q6A162 431 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms