RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GSG1L2A8MUP6 293 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 M0R2C6 588 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 SLC26A4O43511 780 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 ATF3P18847 181 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 IGFALSP35858 605 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 CD83Q01151 205 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 HGFACQ04756 655 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 UBE4AQ14139 1066 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 BRD3Q15059 726 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 PPP4R4Q6NUP7 873 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 CNNM4Q6P4Q7 775 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 GPR135Q8IZ08 494 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 PPM1KQ8N3J5 372 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 BOCQ9BWV1 1114 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 HAPLN2Q9GZV7 340 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 OR10A5Q9H207 317 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 INTS7Q9NVH2 962 aaKnown RBP5.51□□□□□ -1.53
SCAF11-210ENST00000547654 UCKL1Q9NWZ5 548 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 SAMD15Q9P1V8 674 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 CEP72Q9P209 647 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 B4GALT6Q9UBX8 382 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 DMRT1Q9Y5R6 373 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 COMMD10Q9Y6G5 202 aa5.51□□□□□ -1.53
SCAF11-210ENST00000547654 HMGB1P1B2RPK0 211 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-210ENST00000547654 FOXP2O15409 715 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 SCGB1D2O95969 90 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 IRF9Q00978 393 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 ZNF627Q7L945 461 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 LRRTM3Q86VH5 581 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 TMPRSS6Q8IU80 811 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 AFAP1L2Q8N4X5 818 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 CHST14Q8NCH0 376 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 MTMR8Q96EF0 704 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 GBP4Q96PP9 640 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 AGAP2Q99490 1192 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 SMAD5Q99717 465 aaKnown RBP5.5□□□□□ -1.53
SCAF11-210ENST00000547654 TARS2Q9BW92 718 aaKnown RBP5.5□□□□□ -1.53
SCAF11-210ENST00000547654 SLC2A4RGQ9NR83 387 aa5.5□□□□□ -1.53
SCAF11-210ENST00000547654 WASHC2CQ9Y4E1 1318 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 KATNA1O75449 491 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 MYL1P05976 194 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 FNTBP49356 437 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 STAT5BP51692 787 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 NEK2P51955 445 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 ADAM8P78325 824 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 ALDH6A1Q02252 535 aaKnown RBP5.49□□□□□ -1.53
SCAF11-210ENST00000547654 SAFB2Q14151 953 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCAF11-210ENST00000547654 HLTFQ14527 1009 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCAF11-210ENST00000547654 ARHGAP44Q17R89 818 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 MAP9Q49MG5 647 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 ESRP1Q6NXG1 681 aaKnown RBP5.49□□□□□ -1.53
SCAF11-210ENST00000547654 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 DDX46Q7L014 1031 aaKnown RBP5.49□□□□□ -1.53
SCAF11-210ENST00000547654 NECAB2Q7Z6G3 386 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 AHI1Q8N157 1196 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 FOXB1Q99853 325 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 PRDM16Q9HAZ2 1276 aa5.49□□□□□ -1.53
SCAF11-210ENST00000547654 SHTN1A0MZ66 631 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 PRAMEF22A3QJZ6 481 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 PRLP01236 227 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 DSG1Q02413 1049 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 MCL1Q07820 350 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 RIN1Q13671 783 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 MOGSQ13724 837 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 RRP1BQ14684 758 aaKnown RBP5.48□□□□□ -1.53
SCAF11-210ENST00000547654 CDCA2Q69YH5 1023 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-210ENST00000547654 GRAMD4Q6IC98 578 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 CHPFQ8IZ52 775 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 MYO1HQ8N1T3 1032 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 ANKRD35Q8N283 1001 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 C2orf69Q8N8R5 385 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-210ENST00000547654 MPHOSPH6Q99547 160 aaKnown RBP5.48□□□□□ -1.53
SCAF11-210ENST00000547654 TTPALQ9BTX7 342 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 ASPSCR1Q9BZE9 553 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 ZIM2Q9NZV7 527 aa5.48□□□□□ -1.53
SCAF11-210ENST00000547654 A0A1W2PRX2 142 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 E2F8A0AVK6 867 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 PEX11BO96011 259 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 PTX3P26022 381 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-210ENST00000547654 ANTXR2P58335 489 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 ITKQ08881 620 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 STRN3Q13033 797 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 CNGB1Q14028 1251 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-210ENST00000547654 DPY19L2P1Q6NXN4 242 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 TMED8Q6PL24 325 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-210ENST00000547654 KANSL1Q7Z3B3 1105 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 ZBTB46Q86UZ6 589 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 WDR66Q8TBY9 1149 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 NKD2Q969F2 451 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-210ENST00000547654 MPHOSPH9Q99550 1183 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 AASDHPPTQ9NRN7 309 aa5.47□□□□□ -1.53
SCAF11-210ENST00000547654 PTPDC1A2A3K4 754 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 PMS2P1A4D2B8 440 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 TMEM191CA6NGB0 347 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 B4E1Z4 1266 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 TGM5O43548 720 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 APPP05067 770 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 ATP2A2P16615 1042 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms