RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 TUFT1Q9NNX1 390 aa20.78■□□□□ 0.92
CHMP1A-203ENST00000547614 XPNPEP1Q9NQW7 623 aa20.78■□□□□ 0.92
CHMP1A-203ENST00000547614 BMP2KQ9NSY1 1161 aaPredicted RBP20.78■□□□□ 0.92
CHMP1A-203ENST00000547614 PLXNA4Q9HCM2 1894 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 CARNS1A5YM72 827 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 POTEMA6NI47 508 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 CSPG5O95196 566 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 SPATA31C1P0DKV0 1188 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 IL9P15248 144 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 GTF2F1P35269 517 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 RARRES1P49788 294 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 GNL2Q13823 731 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 EFHBQ8N7U6 833 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 HELQQ8TDG4 1101 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 MRPS27Q92552 414 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 CCDC43Q96MW1 224 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 MINDY3Q9H8M7 445 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 SPG21Q9NZD8 308 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 KIF3AQ9Y496 699 aa20.77■□□□□ 0.92
CHMP1A-203ENST00000547614 ARID2Q68CP9 1835 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 FSD2A1L4K1 749 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 OR52Z1P0C646 297 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 U2AF2P26368 475 aaKnown RBP eCLIP20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 HOXA11P31270 313 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 PTENP60484 403 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 KRT17Q04695 432 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 DLX2Q07687 328 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 TFDP1Q14186 410 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 ZNF174Q15697 407 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 TTC38Q5R3I4 469 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 GLB1LQ6UWU2 654 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 ADGRD2Q7Z7M1 963 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 CATSPER3Q86XQ3 398 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 IFNLR1Q8IU57 520 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 PIGOQ8TEQ8 1089 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 PGBD4Q96DM1 585 aa20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 POLR3CQ9BUI4 534 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 NOL7Q9UMY1 257 aaKnown RBP20.76■□□□□ 0.91
CHMP1A-203ENST00000547614 FSCN2O14926 492 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 ARL2P36404 184 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 TECP42680 631 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 NRIP1P48552 1158 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 ERVFC1P60507 584 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 MRPL10Q7Z7H8 261 aaKnown RBP20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 ERMNQ8TAM6 284 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 NACC1Q96RE7 527 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 CDCA3Q99618 268 aaPredicted RBP20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 TLE6Q9H808 572 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 PRKAG3Q9UGI9 489 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 DBR1Q9UK59 544 aaKnown RBP20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 PCDHB2Q9Y5E7 798 aa20.75■□□□□ 0.91
CHMP1A-203ENST00000547614 LINC01565O15544 149 aa20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 TBX10O75333 385 aa20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 MUTP22033 750 aa20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 RPA1P27694 616 aa20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 AXLP30530 894 aa20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 ALDH7A1P49419 539 aaKnown RBP20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 NFKBIZQ9BYH8 718 aa20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 NGRNQ9NPE2 291 aaKnown RBP20.74■□□□□ 0.91
CHMP1A-203ENST00000547614 MED24O75448 989 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 OFD1O75665 1012 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 ERLIN2O94905 339 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 NDUFV1P49821 464 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 NCBP1Q09161 790 aaKnown RBP20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 NOMO2Q5JPE7 1267 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 RBM23Q86U06 439 aaKnown RBP20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 GJD3Q8N144 294 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 SLC39A11Q8N1S5 342 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 C4orf32Q8N8J7 132 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 CNNM3Q8NE01 707 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 LPPQ93052 612 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 MSLNLQ96KJ4 702 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 C1QTNF1Q9BXJ1 281 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 CD320Q9NPF0 282 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 CD207Q9UJ71 328 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 PCDHGC5Q9Y5F6 944 aa20.73■□□□□ 0.91
CHMP1A-203ENST00000547614 MBTPS2O43462 519 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 EYA4O95677 639 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 PBX3P40426 434 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 MCM2P49736 904 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 FXR2P51116 673 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 BCAR1P56945 870 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 SMAD4Q13485 552 aaKnown RBP20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 CAPSQ13938 189 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 SMAD2Q15796 467 aaKnown RBP20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 UBXN11Q5T124 520 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 AGMOQ6ZNB7 445 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 MCPH1Q8NEM0 835 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 ASAP3Q8TDY4 903 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 CCDC51Q96ER9 411 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 TMX3Q96JJ7 454 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 TCF25Q9BQ70 676 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 TBC1D13Q9NVG8 400 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 CLEC1BQ9P126 229 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 CNTNAP2Q9UHC6 1331 aa20.72■□□□□ 0.91
CHMP1A-203ENST00000547614 A0A087WWV3 80 aa20.71■□□□□ 0.91
CHMP1A-203ENST00000547614 MEIS3P2A8K0S8 358 aa20.71■□□□□ 0.91
CHMP1A-203ENST00000547614 INO80B-WBP1J3KQ70 363 aa20.71■□□□□ 0.91
CHMP1A-203ENST00000547614 USO1O60763 962 aaKnown RBP20.71■□□□□ 0.91
CHMP1A-203ENST00000547614 GLRA2P23416 452 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms