RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 IGSF9BQ9UPX0 1349 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 ESYT3A0FGR9 886 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 CLSTN1O94985 981 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 HARSP12081 509 aaKnown RBP12.06□□□□□ -0.48
CUX1-212ENST00000547394 KRT13P13646 458 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 JAK3P52333 1124 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 NAB2Q15742 525 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 EAPPQ56P03 285 aaPredicted RBP12.06□□□□□ -0.48
CUX1-212ENST00000547394 BEND6Q5SZJ8 279 aaPredicted RBP12.06□□□□□ -0.48
CUX1-212ENST00000547394 CCDC181Q5TID7 509 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 SLC39A4Q6P5W5 647 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 NEK9Q8TD19 979 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 DCPSQ96C86 337 aaKnown RBP12.06□□□□□ -0.48
CUX1-212ENST00000547394 BICD1Q96G01 975 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 ZNF408Q9H9D4 720 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 TXNRD2Q9NNW7 524 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 RBM12Q9NTZ6 932 aaKnown RBP12.06□□□□□ -0.48
CUX1-212ENST00000547394 DMGDHQ9UI17 866 aaKnown RBP12.06□□□□□ -0.48
CUX1-212ENST00000547394 ADAMTS5Q9UNA0 930 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 KIAA1217Q5T5P2 1943 aa12.06□□□□□ -0.48
CUX1-212ENST00000547394 RLFQ13129 1914 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 ATP4AP20648 1035 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 CNGA1P29973 690 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 TNNT3P45378 269 aaPredicted RBP12.05□□□□□ -0.48
CUX1-212ENST00000547394 GHRHRQ02643 423 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 DMP1Q13316 513 aaPredicted RBP12.05□□□□□ -0.48
CUX1-212ENST00000547394 SCARA3Q6AZY7 606 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 ZNF662Q6ZS27 426 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 SYN2Q92777 582 aaPredicted RBP12.05□□□□□ -0.48
CUX1-212ENST00000547394 SEMA4DQ92854 862 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
CUX1-212ENST00000547394 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 KCND2Q9NZV8 630 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 TBX20Q9UMR3 447 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 CSADQ9Y600 493 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 DOCK1Q14185 1865 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 H3BQF6 201 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 HNRNPDLO14979 420 aaKnown RBP12.05□□□□□ -0.48
CUX1-212ENST00000547394 PJA2O43164 708 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
CUX1-212ENST00000547394 STAT1P42224 750 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 WNT7BP56706 349 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 DRP2Q13474 957 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 LY6KQ17RY6 165 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 XXYLT1Q8NBI6 393 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 MSANTD4Q8NCY6 345 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
CUX1-212ENST00000547394 NUCKS1Q9H1E3 243 aaKnown RBP12.05□□□□□ -0.48
CUX1-212ENST00000547394 PDE11AQ9HCR9 933 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 APEX2Q9UBZ4 518 aa12.05□□□□□ -0.48
CUX1-212ENST00000547394 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 STBD1O95210 358 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 SOX5P35711 763 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 DMTNQ08495 405 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 LLGL1Q15334 1064 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 TRADDQ15628 312 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 SNRNP35Q16560 246 aaKnown RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 PHLDB2Q86SQ0 1253 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 SPATA4Q8NEY3 305 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 POMGNT1Q8WZA1 660 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 ZBTB45Q96K62 511 aaPredicted RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 FAM213AQ9BRX8 229 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 TMEM117Q9H0C3 514 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 POLR3FQ9H1D9 316 aaPredicted RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 ANO9A1A5B4 782 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 CCDC151A5D8V7 595 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 LRRIQ3A6PVS8 624 aaPredicted RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 KCNK3O14649 394 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 GALCP54803 685 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 FAM193AP78312 1265 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 GTF2BQ00403 316 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 Q3C1V9 767 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 ZBTB41Q5SVQ8 909 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 ADAT2Q7Z6V5 191 aaKnown RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 CCDC125Q86Z20 511 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 OLIG1Q8TAK6 271 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 LMO3Q8TAP4 145 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 GPRASP2Q96D09 838 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 ARHGEF26Q96DR7 871 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 MUTP22033 750 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 OAS2P29728 719 aaKnown RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 SFNP31947 248 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 ACOT2P49753 483 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
CUX1-212ENST00000547394 TAS1R3Q7RTX0 852 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 CYP26B1Q9NR63 512 aa12.04□□□□□ -0.48
CUX1-212ENST00000547394 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
CUX1-212ENST00000547394 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
CUX1-212ENST00000547394 PSAPP07602 524 aa12.03□□□□□ -0.48
CUX1-212ENST00000547394 GJC2Q5T442 439 aaPredicted RBP12.03□□□□□ -0.48
CUX1-212ENST00000547394 ABHD15Q6UXT9 468 aa12.03□□□□□ -0.48
CUX1-212ENST00000547394 CPNE8Q86YQ8 564 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms