RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 CALM1P0DP23 149 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 CALM2P0DP24 149 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 CALM3P0DP25 149 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 ALOX15P16050 662 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 VPS41P49754 854 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 MAN2A1Q16706 1144 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 KCTD21Q4G0X4 260 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 HGSNATQ68CP4 663 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 AADACL2Q6P093 401 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 IZUMO2Q6UXV1 221 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 LZTS2Q9BRK4 669 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 SEMA6BQ9H3T3 888 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 ADAMTS3O15072 1205 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 PRPF3O43395 683 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 STARD3NLO95772 234 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 YY1P25490 414 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 THOC5Q13769 683 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 CCDC92Q53HC0 331 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 SCUBE1Q8IWY4 988 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 C18orf8Q96DM3 657 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 FAM192AQ9GZU8 254 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 SPATA7Q9P0W8 599 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 ATP6V0A2Q9Y487 856 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 SPEF2Q9C093 1822 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 O00370 1275 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 LSM1O15116 133 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 GYG2O15488 501 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 NMT2O60551 498 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 WFS1O76024 890 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 GJB6O95452 261 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ITGA2BP08514 1039 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 BTKQ06187 659 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 KRT79Q5XKE5 535 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 NANOGNBQ7Z5D8 188 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 CCDC105Q8IYK2 499 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 U2AF1L4Q8WU68 220 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 TNFRSF25Q93038 417 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 LENG1Q96BZ8 264 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 PFDN4Q9NQP4 134 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 MCM9Q9NXL9 1143 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 MYH7P12883 1935 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 PASKQ96RG2 1323 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 NEO1Q92859 1461 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 CPA2P48052 419 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 MPP2Q14168 576 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ALX1Q15699 326 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 HERC4Q5GLZ8 1057 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 KIAA1755Q5JYT7 1200 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 GRAMD4Q6IC98 578 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ALKBH5Q6P6C2 394 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 CHKBQ9Y259 395 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 NID2Q14112 1375 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 SMIM22K7EJ46 135 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 PCCAP05165 728 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ACTN1P12814 892 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 VAV1P15498 845 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 PHKG2P15735 406 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 KCNJ1P48048 391 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 TNNI2P48788 182 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 CAPN12Q6ZSI9 719 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 MTDHQ86UE4 582 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 SATL1Q86VE3 508 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ST13P4Q8IZP2 240 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ACTRT1Q8TDG2 376 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ZNF184Q99676 751 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 SLITRK6Q9H5Y7 841 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 UBN1Q9NPG3 1134 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 ZFP69BQ9UJL9 534 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
RBFOX1-208ENST00000547372 DNAJC6O75061 913 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 CCNB1P14635 433 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 PTK2Q05397 1052 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 SLC34A1Q06495 639 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 ANKLE1Q8NAG6 615 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 IFT43Q96FT9 208 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 TIPINQ9BVW5 301 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 LRMDAQ9H2I8 198 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 PRDM11Q9NQV5 511 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 KBTBD4Q9NVX7 518 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 RASAL2Q9UJF2 1139 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 DIP2AQ14689 1571 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 RBAK-RBAKDNI3L0D1 243 aa12.78□□□□□ -0.36
RBFOX1-208ENST00000547372 PDE8BO95263 885 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms