RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 MRPL38Q96DV4 380 aaKnown RBP25.92■■□□□ 1.74
SMARCC2-204ENST00000547356 TMEM117Q9H0C3 514 aa25.92■■□□□ 1.74
SMARCC2-204ENST00000547356 ALG13Q9NP73 1137 aaKnown RBP25.92■■□□□ 1.74
SMARCC2-204ENST00000547356 FAM105AQ9NUU6 356 aa25.92■■□□□ 1.74
SMARCC2-204ENST00000547356 TYW1Q9NV66 732 aaKnown RBP25.92■■□□□ 1.74
SMARCC2-204ENST00000547356 RNF216Q9NWF9 866 aaPredicted RBP25.92■■□□□ 1.74
SMARCC2-204ENST00000547356 RWDD3Q9Y3V2 267 aa25.92■■□□□ 1.74
SMARCC2-204ENST00000547356 TRANK1O15050 2925 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 LRRIQ4A6NIV6 560 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 TSPAN1O60635 241 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 RB1P06400 928 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 UBXN11Q5T124 520 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 IFNLR1Q8IU57 520 aaPredicted RBP25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 CPB2Q96IY4 423 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 PNMA5Q96PV4 448 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 C11orf84Q9BUA3 381 aaPredicted RBP25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 LMCD1Q9NZU5 365 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 CLIC4Q9Y696 253 aa25.91■■□□□ 1.74
SMARCC2-204ENST00000547356 ERLIN2O94905 339 aa25.9■■□□□ 1.74
SMARCC2-204ENST00000547356 AMHR2Q16671 573 aa25.9■■□□□ 1.74
SMARCC2-204ENST00000547356 ARL6IP4Q66PJ3 421 aaKnown RBP25.9■■□□□ 1.74
SMARCC2-204ENST00000547356 ABI1Q8IZP0 508 aa25.9■■□□□ 1.74
SMARCC2-204ENST00000547356 KLHL23Q8NBE8 558 aa25.9■■□□□ 1.74
SMARCC2-204ENST00000547356 CWH43Q9H720 699 aa25.9■■□□□ 1.74
SMARCC2-204ENST00000547356 STK24Q9Y6E0 443 aa25.9■■□□□ 1.74
SMARCC2-204ENST00000547356 B4GALT5O43286 388 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 ITGB1P05556 798 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 DNAJB1P25685 340 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 RUSC1Q9BVN2 902 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 TRAIPQ9BWF2 469 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 PLVAPQ9BX97 442 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 THEGQ9P2T0 379 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 PLAGL2Q9UPG8 496 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 DNM3Q9UQ16 869 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 PCDHB2Q9Y5E7 798 aa25.89■■□□□ 1.74
SMARCC2-204ENST00000547356 HOXA2O43364 376 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 EYA4O95677 639 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 EOMESO95936 686 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 PBX3P40426 434 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 TFF2Q03403 129 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 POU5F1BQ06416 359 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 PTPROQ16827 1216 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 CDR2LQ86X02 465 aaPredicted RBP25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 COLGALT1Q8NBJ5 622 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 KIFC3Q9BVG8 833 aa25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 EIF2AQ9BY44 585 aaKnown RBP25.88■■□□□ 1.73
SMARCC2-204ENST00000547356 STX6O43752 255 aa25.87■■□□□ 1.73
SMARCC2-204ENST00000547356 CEBPZQ03701 1054 aaKnown RBP25.87■■□□□ 1.73
SMARCC2-204ENST00000547356 CAMK1Q14012 370 aa25.87■■□□□ 1.73
SMARCC2-204ENST00000547356 SPRYD3Q8NCJ5 442 aa25.87■■□□□ 1.73
SMARCC2-204ENST00000547356 INPP5FQ9Y2H2 1132 aa25.87■■□□□ 1.73
SMARCC2-204ENST00000547356 USP20Q9Y2K6 914 aa25.87■■□□□ 1.73
SMARCC2-204ENST00000547356 ATG2AQ2TAZ0 1938 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 ARF4P18085 180 aaPredicted RBP25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 RAB27AP51159 221 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 PTPAQ15257 358 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 TCEAL5Q5H9L2 206 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 HYIQ5T013 277 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 FOXD4L5Q5VV16 416 aaPredicted RBP25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 CABP7Q86V35 215 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 LRRC43Q8N309 656 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 SPPL3Q8TCT6 385 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 LRRC15Q8TF66 581 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 FOXD4L4Q8WXT5 416 aaPredicted RBP25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 P2RX5Q93086 422 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 NFKBIZQ9BYH8 718 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 REV3LO60673 3130 aa25.86■■□□□ 1.73
SMARCC2-204ENST00000547356 UNC80Q8N2C7 3258 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 TTLL13PA6NNM8 815 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 ZNF623O75123 536 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 BMP15O95972 392 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 SSBP05455 408 aaKnown RBP eCLIP25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 LIG1P18858 919 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 MARCKSP29966 332 aaPredicted RBP25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 TMEM119Q4V9L6 283 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 CDCA2Q69YH5 1023 aaPredicted RBP25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 AGMOQ6ZNB7 445 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 HES2Q9Y543 173 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 PCDHGC5Q9Y5F6 944 aa25.85■■□□□ 1.73
SMARCC2-204ENST00000547356 MYO7AQ13402 2215 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 EDN1P05305 212 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 SKIP12755 728 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 IRS1P35568 1242 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 AFF1P51825 1210 aaKnown RBP25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 TIGD5Q53EQ6 642 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 RINT1Q6NUQ1 792 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 DAW1Q8N136 415 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 SMG8Q8ND04 991 aaKnown RBP25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 POF1BQ8WVV4 589 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 CDK5RAP3Q96JB5 506 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 PCDHB12Q9Y5F1 795 aa25.84■■□□□ 1.73
SMARCC2-204ENST00000547356 HIP1RO75146 1068 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 OFD1O75665 1012 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 FGF18O76093 207 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 LAG3P18627 525 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 AXLP30530 894 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 NAMPTP43490 491 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 RAD51AP2Q09MP3 1159 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 SPECC1Q5M775 1068 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 NOTUMQ6P988 496 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms