RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 CHRNA5P30532 468 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 HOXA7P31268 230 aaPredicted RBP11.53□□□□□ -0.56
NPAS3-205ENST00000547068 NPEPPSP55786 919 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 CHRNDQ07001 517 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 MAPK7Q13164 816 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 ARMC3Q5W041 872 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 KRT25Q7Z3Z0 450 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 APBB1IPQ7Z5R6 666 aaPredicted RBP11.53□□□□□ -0.56
NPAS3-205ENST00000547068 VPS36Q86VN1 386 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 B4GALNT2Q8NHY0 566 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 GDAP1Q8TB36 358 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 ARHGEF2Q92974 986 aaKnown RBP11.53□□□□□ -0.56
NPAS3-205ENST00000547068 EPAS1Q99814 870 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 GORASP1Q9BQQ3 440 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 VCXQ9H320 206 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 DLGAP2Q9P1A6 1054 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 MINPP1Q9UNW1 487 aa11.53□□□□□ -0.56
NPAS3-205ENST00000547068 UCHL3P15374 230 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 ACADSP16219 412 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.56
NPAS3-205ENST00000547068 MGAT5Q09328 741 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 KCNH2Q12809 1159 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 PARP6Q2NL67 630 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 DCAF12L1Q5VU92 463 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 RNF43Q68DV7 783 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 MFSD5Q6N075 450 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 NEK8Q86SG6 692 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 NELFCDQ8IXH7 590 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 DNAJC9Q8WXX5 260 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 RAD54LQ92698 747 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 BORCS6Q96GS4 357 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 LRRC27Q9C0I9 530 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 KCNK9Q9NPC2 374 aa11.52□□□□□ -0.56
NPAS3-205ENST00000547068 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.56
NPAS3-205ENST00000547068 PPEF1O14829 653 aaPredicted RBP11.52□□□□□ -0.57
NPAS3-205ENST00000547068 PYGLP06737 847 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 SLC9A1P19634 815 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 RFC5P40937 340 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 MARSP56192 900 aaKnown RBP11.52□□□□□ -0.57
NPAS3-205ENST00000547068 POLE2P56282 527 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 RNASELQ05823 741 aaKnown RBP11.52□□□□□ -0.57
NPAS3-205ENST00000547068 CCDC15Q0P6D6 951 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 COASYQ13057 564 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 RNF220Q5VTB9 566 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 ARHGAP22Q7Z5H3 698 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.52□□□□□ -0.57
NPAS3-205ENST00000547068 PNMA1Q8ND90 353 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 CKAP2Q8WWK9 683 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 TGS1Q96RS0 853 aaKnown RBP11.52□□□□□ -0.57
NPAS3-205ENST00000547068 DDX23Q9BUQ8 820 aaKnown RBP11.52□□□□□ -0.57
NPAS3-205ENST00000547068 ZCWPW1Q9H0M4 648 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 OSGEPQ9NPF4 335 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 GRHL1Q9NZI5 618 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 PARP2Q9UGN5 583 aa11.52□□□□□ -0.57
NPAS3-205ENST00000547068 DDX3YO15523 660 aaKnown RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 CREB1P16220 341 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 RPL21P46778 160 aaKnown RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 PTDSS1P48651 473 aaKnown RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 GNAQP50148 359 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 RBM5P52756 815 aaKnown RBP eCLIP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 MKRN3Q13064 507 aaKnown RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 CUL3Q13618 768 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 LONRF1Q17RB8 773 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 INTS8Q75QN2 995 aaKnown RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 VSIG1Q86XK7 387 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ECHDC2Q86YB7 292 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 SP8Q8IXZ3 490 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ANKLE1Q8NAG6 615 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ASAP3Q8TDY4 903 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 U2AF1L4Q8WU68 220 aaKnown RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 C18orf8Q96DM3 657 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ROPN1BQ9BZX4 212 aaPredicted RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 CARD9Q9H257 536 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ROPN1Q9HAT0 212 aaPredicted RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 TBC1D7Q9P0N9 293 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 INTUQ9ULD6 942 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 H0Y3Z8 333 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ATP5HO75947 161 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 RARGP13631 454 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 DPEP1P16444 411 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 NAPAP54920 295 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 MUM1Q2TAK8 710 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 FAM26FQ5R3K3 315 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 VSTM1Q6UX27 236 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 LONP2Q86WA8 852 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 TTLL6Q8N841 843 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
NPAS3-205ENST00000547068 LRMDAQ9H2I8 198 aa11.51□□□□□ -0.57
NPAS3-205ENST00000547068 ATAD5Q96QE3 1844 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 A0A1B0GVG6 124 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 CYTH3O43739 400 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 BAG3O95817 575 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms