RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 DHX33Q9H6R0 707 aaKnown RBP20.95■□□□□ 0.94
CHPT1-202ENST00000546490 AGPAT5Q9NUQ2 364 aa20.95■□□□□ 0.94
CHPT1-202ENST00000546490 WRAP73Q9P2S5 460 aaPredicted RBP20.95■□□□□ 0.94
CHPT1-202ENST00000546490 TDRD15B5MCY1 1934 aaKnown RBP20.94■□□□□ 0.94
CHPT1-202ENST00000546490 FAM205CA6NFA0 338 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 HIDE1A8MVS5 230 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 ZC3H11AO75152 810 aaKnown RBP eCLIP20.94■□□□□ 0.94
CHPT1-202ENST00000546490 BCAR1P56945 870 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 BMS1Q14692 1282 aaKnown RBP20.94■□□□□ 0.94
CHPT1-202ENST00000546490 TMEM184AQ6ZMB5 413 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 NECAB1Q8N987 351 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 TCP11Q8WWU5 503 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 PHF7Q9BWX1 381 aaPredicted RBP20.94■□□□□ 0.94
CHPT1-202ENST00000546490 ZSWIM4Q9H7M6 989 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 IFT122Q9HBG6 1241 aa20.94■□□□□ 0.94
CHPT1-202ENST00000546490 LOC730098B7Z3J9 87 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 LARGE1O95461 756 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 TECP42680 631 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 SPIRE1Q08AE8 756 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 KCNC3Q14003 757 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 EMC2Q15006 297 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 ME3Q16798 604 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 ERICH6BQ5W0A0 696 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 ANKRD54Q6NXT1 300 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 LLGL2Q6P1M3 1020 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 SRGAP1Q7Z6B7 1085 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 TNFRSF25Q93038 417 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 LPPQ93052 612 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 DYDC2Q96IM9 177 aa20.93■□□□□ 0.94
CHPT1-202ENST00000546490 BMP2KQ9NSY1 1161 aaPredicted RBP20.93■□□□□ 0.94
CHPT1-202ENST00000546490 ZNF623O75123 536 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 FDPSP14324 419 aaKnown RBP20.92■□□□□ 0.94
CHPT1-202ENST00000546490 CA8P35219 290 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 CYP4A11Q02928 519 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 TRIM29Q14134 588 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 LONRF3Q496Y0 759 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 XKR9Q5GH70 373 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 NOMO2Q5JPE7 1267 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 ZNF579Q8NAF0 562 aaKnown RBP20.92■□□□□ 0.94
CHPT1-202ENST00000546490 NSUN7Q8NE18 718 aaKnown RBP20.92■□□□□ 0.94
CHPT1-202ENST00000546490 PRPF31Q8WWY3 499 aaKnown RBP20.92■□□□□ 0.94
CHPT1-202ENST00000546490 SUSD6Q92537 303 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 CASP10Q92851 521 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 TMEM143Q96AN5 459 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 PGBD4Q96DM1 585 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 TBC1D13Q9NVG8 400 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 RGL1Q9NZL6 768 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 INPP5FQ9Y2H2 1132 aa20.92■□□□□ 0.94
CHPT1-202ENST00000546490 NT5C1B-RDH14C9J2C7 533 aa20.91■□□□□ 0.94
CHPT1-202ENST00000546490 SRGAP2CP0DJJ0 459 aa20.91■□□□□ 0.94
CHPT1-202ENST00000546490 HOXB8P17481 243 aaPredicted RBP20.91■□□□□ 0.94
CHPT1-202ENST00000546490 RNASELQ05823 741 aaKnown RBP20.91■□□□□ 0.94
CHPT1-202ENST00000546490 LAMTOR4Q0VGL1 99 aa20.91■□□□□ 0.94
CHPT1-202ENST00000546490 CTTNQ14247 550 aaKnown RBP20.91■□□□□ 0.94
CHPT1-202ENST00000546490 CBX2Q14781 532 aaPredicted RBP20.91■□□□□ 0.94
CHPT1-202ENST00000546490 CALCRLQ16602 461 aa20.91■□□□□ 0.94
CHPT1-202ENST00000546490 ZNF318Q5VUA4 2279 aa20.91■□□□□ 0.94
CHPT1-202ENST00000546490 URGCPQ8TCY9 931 aa20.91■□□□□ 0.94
CHPT1-202ENST00000546490 CCDC43Q96MW1 224 aaKnown RBP20.91■□□□□ 0.94
CHPT1-202ENST00000546490 MTRQ99707 1265 aa20.91■□□□□ 0.94
CHPT1-202ENST00000546490 MUC6Q6W4X9 2439 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 TECTAO75443 2155 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 C2orf71A6NGG8 1288 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 NEMFO60524 1076 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 NEK4P51957 841 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 FERMT3Q86UX7 667 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 TPH2Q8IWU9 490 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 DIS3L2Q8IYB7 885 aaKnown RBP20.9■□□□□ 0.94
CHPT1-202ENST00000546490 MRPL43Q8N983 215 aaKnown RBP20.9■□□□□ 0.94
CHPT1-202ENST00000546490 RPGRIP1Q96KN7 1286 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 PCDHA12Q9UN75 941 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 PCDHB2Q9Y5E7 798 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 HCFC2Q9Y5Z7 792 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 DENND4AQ7Z401 1863 aa20.9■□□□□ 0.94
CHPT1-202ENST00000546490 WDFY4Q6ZS81 3184 aa20.89■□□□□ 0.94
CHPT1-202ENST00000546490 CNTNAP2Q9UHC6 1331 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.89■□□□□ 0.93
CHPT1-202ENST00000546490 MEIS3P2A8K0S8 358 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 ASAP2O43150 1006 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 ERLIN2O94905 339 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 FOSBP53539 338 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 TPRNQ4KMQ1 711 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 SYCE2Q6PIF2 218 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 TMEM173Q86WV6 379 aaPredicted RBP20.89■□□□□ 0.93
CHPT1-202ENST00000546490 VPS52Q8N1B4 723 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 RNF149Q8NC42 400 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 EDAQ92838 391 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 EIF2AK1Q9BQI3 630 aaKnown RBP20.89■□□□□ 0.93
CHPT1-202ENST00000546490 ZBP1Q9H171 429 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 NRDE2Q9H7Z3 1164 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 MINDY3Q9H8M7 445 aa20.89■□□□□ 0.93
CHPT1-202ENST00000546490 BTBD18B2RXH4 712 aa20.88■□□□□ 0.93
CHPT1-202ENST00000546490 JAK2O60674 1132 aa20.88■□□□□ 0.93
CHPT1-202ENST00000546490 OFD1O75665 1012 aa20.88■□□□□ 0.93
CHPT1-202ENST00000546490 GIT2Q14161 759 aa20.88■□□□□ 0.93
CHPT1-202ENST00000546490 MXD4Q14582 209 aaPredicted RBP20.88■□□□□ 0.93
CHPT1-202ENST00000546490 PCBP1Q15365 356 aaKnown RBP eCLIP20.88■□□□□ 0.934e-29■■■■□ 20.9
CHPT1-202ENST00000546490 HFE2Q6ZVN8 426 aa20.88■□□□□ 0.93
CHPT1-202ENST00000546490 TMEM87AQ8NBN3 555 aa20.88■□□□□ 0.93
CHPT1-202ENST00000546490 IGSF21Q96ID5 467 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms