RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 NCF2P19878 526 aaPredicted RBP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 KLRC1P26715 233 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 SLC35G2Q8TBE7 412 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 ANKS1AQ92625 1134 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 IL17RAQ96F46 866 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 USP15Q9Y4E8 981 aaPredicted RBP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 GRAMD1BQ3KR37 738 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 MTERF2Q49AM1 385 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 WDR75Q8IWA0 830 aaKnown RBP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 SERPINI1Q99574 410 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 MED10Q9BTT4 135 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 LCMT1Q9UIC8 334 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 ARFIP2P53365 341 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 STAT4Q14765 748 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 EDRF1Q3B7T1 1238 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 IZUMO3Q5VZ72 239 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 TRMT10CQ7L0Y3 403 aaKnown RBP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 DEPDC1BQ8WUY9 529 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 STK33Q9BYT3 514 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 CD209Q9NNX6 404 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 SLC40A1Q9NP59 571 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 UBE2Q2LH0YL09 131 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 STXBP3O00186 592 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 PRLRP16471 622 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 DCAF15Q66K64 600 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 KRT39Q6A163 491 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 SLFN12LQ6IEE8 588 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 OSBPL1AQ9BXW6 950 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.05□□□□□ -0.32
NPC1L1-204ENST00000546276 NPHP3-ACAD11A0A0J9YXS1 232 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 ZWINTO95229 277 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 CCND2P30279 289 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PRKG1Q13976 671 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PLCB4Q15147 1175 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 DDX42Q86XP3 938 aaKnown RBP eCLIP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PPWD1Q96BP3 646 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 MSTO1Q9BUK6 570 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 EFHD1Q9BUP0 239 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 USP21Q9UK80 565 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PIK3C2BO00750 1634 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 TRPA1O75762 1119 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 EYA4O95677 639 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 TTC4O95801 387 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PSAPP07602 524 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 MYBL1P10243 752 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 ESRRGP62508 458 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 MDM2Q00987 491 aaPredicted RBP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 OR6B2Q6IFH4 312 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 RHOT1Q8IXI2 618 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 TMEM35BQ8NCS4 154 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 ARMC2Q8NEN0 867 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 FAF2Q96CS3 445 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 EIF2AK1Q9BQI3 630 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 COL15A1P39059 1388 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 OVOS2A0A0G2JMS6 1433 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 SYNJ2BP-COX16A0A087WUM0 186 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 INO80B-WBP1J3KQ70 363 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 RTN2O75298 545 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 KRT38O76015 456 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PLEKP08567 350 aaPredicted RBP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 EHD2Q9NZN4 543 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 COX16Q9P0S2 106 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 CCT8L1PA6NM43 557 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 GOLGA8MH3BSY2 632 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 FOXP2O15409 715 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 ARL4AP40617 200 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 JAK3P52333 1124 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 GPS1Q13098 491 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 SURF1Q15526 300 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 TRPM8Q7Z2W7 1104 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 PASD1Q8IV76 773 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 SENP1Q9P0U3 644 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 MID2Q9UJV3 735 aa13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-204ENST00000546276 K7ERI5 159 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 SLC16A4O15374 487 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 GH2P01242 217 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 CALB1P05937 261 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 HERVK_113P62684 666 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 CDK17Q00537 523 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 SYDE1Q6ZW31 735 aaPredicted RBP13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 FBXL16Q8N461 479 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms