RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TRAPPC9Q96Q05 1148 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 PIGSQ96S52 555 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 KRT12Q99456 494 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 NUDT12Q9BQG2 462 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 IFIH1Q9BYX4 1025 aaKnown RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 MTFR1LQ9H019 292 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 FAM207AQ9NSI2 230 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
UBR1-202ENST00000546274 GREB1LQ9C091 1923 aaPredicted RBP8.49□□□□□ -1.05
UBR1-202ENST00000546274 DYTNA2CJ06 578 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 LRRC53A6NM62 1247 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 F8VZ95 297 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 PRLRP16471 622 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 EIF4A3P38919 411 aaKnown RBP8.48□□□□□ -1.05
UBR1-202ENST00000546274 PPP1R2P41236 205 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 CDK8P49336 464 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 ZNF844Q08AG5 666 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 HGSNATQ68CP4 663 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 KCNK18Q7Z418 384 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 SMYD1Q8NB12 490 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 TRIM11Q96F44 468 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
UBR1-202ENST00000546274 GPR101Q96P66 508 aaPredicted RBP8.48□□□□□ -1.05
UBR1-202ENST00000546274 NR1H4Q96RI1 486 aaPredicted RBP8.48□□□□□ -1.05
UBR1-202ENST00000546274 NUDCD1Q96RS6 583 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 C6orf50Q9HD87 102 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 ABCB11O95342 1321 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 PENKP01210 267 aaPredicted RBP8.48□□□□□ -1.05
UBR1-202ENST00000546274 UBTFL6P0CB48 400 aaPredicted RBP8.48□□□□□ -1.05
UBR1-202ENST00000546274 TXKP42681 527 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 FXR2P51116 673 aaKnown RBP eCLIP8.48□□□□□ -1.05
UBR1-202ENST00000546274 COPS2P61201 443 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 RASSF7Q02833 373 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 CNPY1Q3B7I2 92 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 UNC13DQ70J99 1090 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 GET4Q7L5D6 327 aaPredicted RBP8.48□□□□□ -1.05
UBR1-202ENST00000546274 KLHL7Q8IXQ5 586 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 NEDD1Q8NHV4 660 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 WDR60Q8WVS4 1066 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 KCNN1Q92952 543 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 CEP95Q96GE4 821 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 IFT74Q96LB3 600 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 EYA3Q99504 573 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 ARHGEF38Q9NXL2 777 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 PNMA2Q9UL42 364 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 ADAMTSL1Q8N6G6 1762 aa8.48□□□□□ -1.05
UBR1-202ENST00000546274 ESYT2A0FGR8 921 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 TLDC2A0PJX2 215 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 PJA2O43164 708 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 CALB2P22676 271 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 GNA11P29992 359 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 MLH1P40692 756 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 PTDSS1P48651 473 aaKnown RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 CCNG1P51959 295 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 KCNMA1Q12791 1236 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 ORC2Q13416 577 aaPredicted RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 ECM1Q16610 540 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 MAN2A1Q16706 1144 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 SLC44A4Q53GD3 710 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 DDX42Q86XP3 938 aaKnown RBP eCLIP8.47□□□□□ -1.05
UBR1-202ENST00000546274 IQCDQ96DY2 449 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 CENPOQ9BU64 300 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 OXCT2Q9BYC2 517 aaPredicted RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 RIOX1Q9H6W3 641 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 PCDH18Q9HCL0 1135 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 DAAM1Q9Y4D1 1078 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 PVALEFA0A1B0GWK0 134 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 POTEMA6NI47 508 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 USP17L5A8MUK1 530 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 TACC1O75410 805 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 TDP2O95551 362 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 CHN1P15882 459 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 AMPD3Q01432 767 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 MYBPC2Q14324 1141 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 ZCWPW2Q504Y3 356 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 SV2BQ7L1I2 683 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 DYMQ7RTS9 669 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 REXO1Q8N1G1 1221 aaKnown RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 GUF1Q8N442 669 aaKnown RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 LARP4BQ92615 738 aaKnown RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 MTMR8Q96EF0 704 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 TLR10Q9BXR5 811 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 RNPEPL1Q9HAU8 725 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 ETNK1Q9HBU6 452 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 NPHP3-ACAD11A0A0J9YXS1 232 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 MAGEB3O15480 346 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 BAG3O95817 575 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 ZFXP17010 805 aaPredicted RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 GNAZP19086 355 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 BTDP43251 543 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 GFPT1Q06210 699 aaPredicted RBP8.47□□□□□ -1.05
UBR1-202ENST00000546274 SPA17Q15506 151 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 TMEM119Q4V9L6 283 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 SLC15A3Q8IY34 581 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 RAD54LQ92698 747 aa8.47□□□□□ -1.05
UBR1-202ENST00000546274 IFT43Q96FT9 208 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms