RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 TNMDQ9H2S6 317 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
LTBR-214ENST00000545445 BLOC1S4Q9NUP1 217 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 SETD4Q9NVD3 440 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 MUTYHQ9UIF7 546 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 INSL6Q9Y581 213 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 PCDHA2Q9Y5H9 948 aa13.14□□□□□ -0.31
LTBR-214ENST00000545445 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 IGKV6-21A0A0C4DH24 114 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
LTBR-214ENST00000545445 ZNF202O95125 648 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
LTBR-214ENST00000545445 C22orf31O95567 290 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
LTBR-214ENST00000545445 MYL1P05976 194 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 CYP11B2P19099 503 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 DNM2P50570 870 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 IGBP1P78318 339 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 CDC42EP1Q00587 391 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 CLUL1Q15846 466 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
LTBR-214ENST00000545445 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 MARCH8Q5T0T0 291 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 ZNF618Q5T7W0 954 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 MTHFD1LQ6UB35 978 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 KCNK18Q7Z418 384 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
LTBR-214ENST00000545445 NME8Q8N427 588 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 ENGASEQ8NFI3 743 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 TCP11Q8WWU5 503 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 MFSD14AQ96MC6 490 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 GOLPH3LQ9H4A5 285 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 KBTBD4Q9NVX7 518 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 PRKAG3Q9UGI9 489 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 FAM50BQ9Y247 325 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 TRIOO75962 3097 aa13.13□□□□□ -0.31
LTBR-214ENST00000545445 WDR81Q562E7 1941 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 SMIM35A0A1B0GVV1 85 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 TMEM150BA6NC51 233 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
LTBR-214ENST00000545445 CAND2O75155 1236 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 MBD3O95983 291 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 AMHP03971 560 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 GUCY2CP25092 1073 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 HTRA4P83105 476 aaPredicted RBP13.12□□□□□ -0.31
LTBR-214ENST00000545445 PTK7Q13308 1070 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 GPM6BQ13491 265 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 MCM6Q14566 821 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 IER5Q5VY09 327 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 RPAINQ86UA6 219 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 RSPH3Q86UC2 560 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 SERINC5Q86VE9 423 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 ELOA2Q8IYF1 753 aaPredicted RBP13.12□□□□□ -0.31
LTBR-214ENST00000545445 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
LTBR-214ENST00000545445 MTRQ99707 1265 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 NSUN3Q9H649 340 aaKnown RBP13.12□□□□□ -0.31
LTBR-214ENST00000545445 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
LTBR-214ENST00000545445 HOOK1Q9UJC3 728 aaKnown RBP13.12□□□□□ -0.31
LTBR-214ENST00000545445 LOXHD1Q8IVV2 1947 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 A0A087WWV3 80 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 H3BNC9 293 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 ASAP2O43150 1006 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 TREHO43280 583 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 ACTN4O43707 911 aaKnown RBP13.11□□□□□ -0.31
LTBR-214ENST00000545445 USO1O60763 962 aaKnown RBP13.11□□□□□ -0.31
LTBR-214ENST00000545445 ZNF200P98182 395 aaPredicted RBP13.11□□□□□ -0.31
LTBR-214ENST00000545445 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
LTBR-214ENST00000545445 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
LTBR-214ENST00000545445 EMC2Q15006 297 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 LONRF3Q496Y0 759 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 EFCAB12Q6NXP0 572 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 CNNM4Q6P4Q7 775 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 KRBA2Q6ZNG9 492 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 LINC01465Q8N7H1 131 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 DBF4BQ8NFT6 615 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 LRRC15Q8TF66 581 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 TRAPPC12Q8WVT3 735 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 DRC1Q96MC2 740 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 MAP7D2Q96T17 732 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 YME1L1Q96TA2 773 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 SH2D3AQ9BRG2 576 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 C17orf75Q9HAS0 396 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 SERTAD1Q9UHV2 236 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 ODF2LQ9ULJ1 636 aa13.11□□□□□ -0.31
LTBR-214ENST00000545445 NR1I2O75469 434 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms