RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 VPS54Q9P1Q0 977 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 TUBE1Q9UJT0 475 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 YBX2Q9Y2T7 364 aaKnown RBP8.71□□□□□ -1.02
SNHG1-223ENST00000545440 UNC80Q8N2C7 3258 aa8.71□□□□□ -1.02
SNHG1-223ENST00000545440 BRWD1Q9NSI6 2320 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 TRANK1O15050 2925 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 RSPH10B2B2RC85 870 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 IPO5O00410 1097 aaKnown RBP8.7□□□□□ -1.02
SNHG1-223ENST00000545440 ADAMTS3O15072 1205 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 RSPH10BP0C881 870 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 MARK3P27448 753 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 CIITAP33076 1130 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 EIF1AXP47813 144 aaKnown RBP8.7□□□□□ -1.02
SNHG1-223ENST00000545440 SLC26A2P50443 739 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 RABGGTBP53611 331 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 SSRP1Q08945 709 aaKnown RBP8.7□□□□□ -1.02
SNHG1-223ENST00000545440 GRIN2CQ14957 1233 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 ANKRD1Q15327 319 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 GRIK4Q16099 956 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 PLEKHG4Q58EX7 1191 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 FAM26DQ5JW98 314 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 GALNT17Q6IS24 598 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 RIPOR1Q6ZS17 1223 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 PLA2G4DQ86XP0 818 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 HERC6Q8IVU3 1022 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 DAGLBQ8NCG7 672 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 MAFAQ8NHW3 353 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-223ENST00000545440 PIK3R5Q8WYR1 880 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 TNPO1Q92973 898 aaKnown RBP8.7□□□□□ -1.02
SNHG1-223ENST00000545440 PCYT2Q99447 389 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 C22orf23Q9BZE7 217 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 NKX2-4Q9H2Z4 354 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 SLC28A3Q9HAS3 691 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 PCDHA4Q9UN74 947 aa8.7□□□□□ -1.02
SNHG1-223ENST00000545440 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 IGKV6D-21A0A0A0MT36 114 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 RRN3P2A6NIE6 340 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 KIF28PB7ZC32 967 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 TGFBR3LH3BV60 316 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 DHX15O43143 795 aaKnown RBP8.69□□□□□ -1.02
SNHG1-223ENST00000545440 PFKFB2O60825 505 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 PPFIA3O75145 1194 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 CCNE2O96020 404 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 CA3P07451 260 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 CTSHP09668 335 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 STAT5BP51692 787 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 USP11P51784 963 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 NLRP5P59047 1200 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 KRT76Q01546 638 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 SCRN1Q12765 414 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 STK3Q13188 491 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 IKBKEQ14164 716 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 LBRQ14739 615 aaKnown RBP8.69□□□□□ -1.02
SNHG1-223ENST00000545440 FAM160B1Q5W0V3 765 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 ZNF746Q6NUN9 644 aaPredicted RBP8.69□□□□□ -1.02
SNHG1-223ENST00000545440 FIGNL1Q6PIW4 674 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 Q6ZNB5 142 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 RSPH3Q86UC2 560 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 SMAP1Q8IYB5 467 aaPredicted RBP8.69□□□□□ -1.02
SNHG1-223ENST00000545440 ZNF295-AS1Q8N0V1 137 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 RASGRP4Q8TDF6 673 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 APBB2Q92870 758 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 LENG9Q96B70 501 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 ZNF577Q9BSK1 485 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
SNHG1-223ENST00000545440 GPAMQ9HCL2 828 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 TBC1D22BQ9NU19 505 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 TCEAL9Q9UHQ7 104 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 LRFN2Q9ULH4 789 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 TPCN1Q9ULQ1 816 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 FNDC3AQ9Y2H6 1198 aaKnown RBP8.69□□□□□ -1.02
SNHG1-223ENST00000545440 COL1A2P08123 1366 aa8.69□□□□□ -1.02
SNHG1-223ENST00000545440 PLXNA4Q9HCM2 1894 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 A0A1W2PNR3 127 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 DDX39AO00148 427 aaKnown RBP8.68□□□□□ -1.02
SNHG1-223ENST00000545440 GJB5O95377 273 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 INSRRP14616 1297 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 MYOGP15173 224 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 AK2P54819 239 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 DEFB103AP81534 67 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 EHHADHQ08426 723 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 PLCB4Q15147 1175 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 NPY5RQ15761 445 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 TCTN1Q2MV58 587 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 PRR16Q569H4 304 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 MARCH8Q5T0T0 291 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 IER5Q5VY09 327 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 MIS18BP1Q6P0N0 1132 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 MOXD1Q6UVY6 613 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 ABHD15Q6UXT9 468 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 CCDC60Q8IWA6 550 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-223ENST00000545440 BLIDQ8IZY5 108 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 SLC17A8Q8NDX2 589 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 ATP8B4Q8TF62 1192 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 SEPT8Q92599 483 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 SUSD3Q96L08 255 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms