RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
CHD4-211ENST00000544484 KLC2Q9H0B6 622 aa13.68□□□□□ -0.22
CHD4-211ENST00000544484 ASNSD1Q9NWL6 643 aa13.68□□□□□ -0.22
CHD4-211ENST00000544484 ZNRF3Q9ULT6 936 aa13.68□□□□□ -0.22
CHD4-211ENST00000544484 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 C6orf118Q5T5N4 469 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 THEM5Q8N1Q8 247 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 CDC26Q8NHZ8 85 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 ALKBH8Q96BT7 664 aaKnown RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 CNOT10Q9H9A5 744 aaKnown RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 PI4K2BG5E9Z4 385 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 EIF3BP55884 814 aaKnown RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 PDCLQ13371 301 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■□ 22
CHD4-211ENST00000544484 MLXIPLQ9NP71 852 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 EYA4O95677 639 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 CALB1P05937 261 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 CFLARO15519 480 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 RPSAP08865 295 aaKnown RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 IQANK1A0A1B0GTG1 560 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 NTSR2O95665 410 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 SDC4P31431 198 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.223e-7■■■■□ 23.9
CHD4-211ENST00000544484 BZW1Q7L1Q6 419 aaKnown RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 GPD1LQ8N335 351 aa13.67□□□□□ -0.22
CHD4-211ENST00000544484 JPH1Q9HDC5 661 aaPredicted RBP13.67□□□□□ -0.22
CHD4-211ENST00000544484 USP42Q9H9J4 1324 aaKnown RBP13.66□□□□□ -0.22
CHD4-211ENST00000544484 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 ADCY2Q08462 1091 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 TTC1Q99614 292 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 C2orf40Q9H1Z8 148 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 TTC4O95801 387 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 SDCCAG3Q96C92 435 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 ELAC2Q9BQ52 826 aaKnown RBP13.66□□□□□ -0.22
CHD4-211ENST00000544484 SUGT1Q9Y2Z0 365 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 PIK3R2O00459 728 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 TXNP10599 105 aaKnown RBP13.66□□□□□ -0.22
CHD4-211ENST00000544484 ARL4CP56559 192 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 TFDP2Q14188 446 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 IRX2Q9BZI1 471 aaPredicted RBP13.66□□□□□ -0.22
CHD4-211ENST00000544484 FRMD3A2A2Y4 597 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 MAP2K2P36507 400 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 TMEM143Q96AN5 459 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 INTUQ9ULD6 942 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 ARHGEF40Q8TER5 1519 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 A8MXQ7 604 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 CYP26A1O43174 497 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 RASA1P20936 1047 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 STAT5BP51692 787 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 NME3Q13232 169 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 FBXL13Q8NEE6 735 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
CHD4-211ENST00000544484 ANO9A1A5B4 782 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 TBXAS1P24557 533 aaPredicted RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 TRIM67Q6ZTA4 783 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 VGLL3A8MV65 326 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 ATP1A1P05023 1023 aaKnown RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 FAM102AQ5T9C2 384 aaPredicted RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 CHP1Q99653 195 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 STRIP2Q9ULQ0 834 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 HMGB1P1B2RPK0 211 aaPredicted RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 RASA4BC9J798 803 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 RASA4O43374 803 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 SLC8A1P32418 973 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 FOXD4Q12950 439 aaPredicted RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 COG2Q14746 738 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 SBK1Q52WX2 424 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 SRRM1Q8IYB3 904 aaKnown RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 EVI5O60447 810 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 ACOT2P49753 483 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 COG7P83436 770 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 TSPY1Q01534 308 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 PDIA5Q14554 519 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 PRR12Q9ULL5 1215 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 CIITAP33076 1130 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 KPNA2P52292 529 aaKnown RBP13.65□□□□□ -0.22
CHD4-211ENST00000544484 VPS72Q15906 364 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 C1orf54Q8WWF1 131 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 FGD4Q96M96 766 aa13.65□□□□□ -0.22
CHD4-211ENST00000544484 A0A0G2JND7 137 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 PDHBP11177 359 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 PDIA6Q15084 440 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 EXOC4Q96A65 974 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 GCOM2Q9BZD3 368 aaPredicted RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 CCSER1Q9C0I3 900 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms