RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 SLC35C1Q96A29 364 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 CCDC17Q96LX7 622 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 LXNQ9BS40 222 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 PI4K2AQ9BTU6 479 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 ACTR5Q9H9F9 607 aaPredicted RBP14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 AIPL1Q9NZN9 384 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 AJAP1Q9UKB5 411 aaPredicted RBP14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 FOSP01100 380 aaPredicted RBP14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 BRAFP15056 766 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 HSPA9P38646 679 aaKnown RBP14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 STAT2P52630 851 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 ATP11AP98196 1134 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 RNF207Q6ZRF8 634 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 IRF2BP2Q7Z5L9 587 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 TMC3Q7Z5M5 1100 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 AMIGO3Q86WK7 504 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 PALB2Q86YC2 1186 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 OGFOD1Q8N543 542 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 SUPT20HQ8NEM7 779 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 RNF25Q96BH1 459 aaPredicted RBP14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 NACC1Q96RE7 527 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 AGPAT1Q99943 283 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 TEKT3Q9BXF9 490 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 L3MBTL1Q9Y468 752 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 SPEF2Q9C093 1822 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 AKAP11Q9UKA4 1901 aa14.23□□□□□ -0.13
PCMTD1-208ENST00000544451 SUN1O94901 812 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 RPA1P27694 616 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SCTRP47872 440 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 RHBDL3P58872 404 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 GPC5P78333 572 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SKOR1P84550 965 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 PADI6Q6TGC4 694 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 BARGINQ6ZT62 677 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 ZNF564Q8TBZ8 553 aaPredicted RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 KIFAP3Q92845 792 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 GANQ9H2C0 597 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SYNCQ9H7C4 482 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 APEX2Q9UBZ4 518 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 F8VZ95 297 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 HNRNPDLO14979 420 aaKnown RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 ECE1P42892 770 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 DAB2IPQ5VWQ8 1189 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 GPRC5CQ9NQ84 441 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 DDTLA6NHG4 134 aaPredicted RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 PI4K2BG5E9Z4 385 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 GAP43P17677 238 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SEMA3FQ13275 785 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SLC10A5Q5PT55 438 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 NT5DC3Q86UY8 548 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SYN2Q92777 582 aaPredicted RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 CNOT10Q9H9A5 744 aaKnown RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 ALG13Q9NP73 1137 aaKnown RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 CCPG1Q9ULG6 757 aa14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 N4BP2Q86UW6 1770 aaPredicted RBP14.22□□□□□ -0.13
PCMTD1-208ENST00000544451 SHOX2O60902 331 aaPredicted RBP14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 SMTNP53814 917 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 EIF3BP55884 814 aaKnown RBP14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 C6orf118Q5T5N4 469 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 HHATQ5VTY9 493 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 SYT2Q8N9I0 419 aaPredicted RBP14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 PWWP2AQ96N64 755 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 STK33Q9BYT3 514 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 ERVK-5Q9HDB9 667 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 RAD17O75943 681 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 GCKP35557 465 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 VAMP7P51809 220 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 ITIH3Q06033 890 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 WDR44Q5JSH3 913 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 DCUN1D2Q6PH85 259 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 IFT74Q96LB3 600 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 CBWD1Q9BRT8 395 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 VCPKMTQ9H867 229 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 ANKFY1Q9P2R3 1169 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 PARP2Q9UGN5 583 aa14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.13
PCMTD1-208ENST00000544451 SGPL1O95470 568 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 EYA4O95677 639 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 KRT17Q04695 432 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 CPA5Q8WXQ8 436 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 DDX23Q9BUQ8 820 aaKnown RBP14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 SUCLA2Q9P2R7 463 aaPredicted RBP14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 INTUQ9ULD6 942 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 AGTPBP1Q9UPW5 1226 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 IKBKGQ9Y6K9 419 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 MYO3BQ8WXR4 1341 aa14.21□□□□□ -0.14
PCMTD1-208ENST00000544451 IPO5O00410 1097 aaKnown RBP14.2□□□□□ -0.14
PCMTD1-208ENST00000544451 SHMT1P34896 483 aa14.2□□□□□ -0.14
PCMTD1-208ENST00000544451 RWDD2BP57060 319 aa14.2□□□□□ -0.14
PCMTD1-208ENST00000544451 PPP2R5AQ15172 486 aa14.2□□□□□ -0.14
PCMTD1-208ENST00000544451 WDR78Q5VTH9 848 aa14.2□□□□□ -0.14
PCMTD1-208ENST00000544451 KCTD10Q9H3F6 313 aa14.2□□□□□ -0.14
PCMTD1-208ENST00000544451 CTNNAL1Q9UBT7 734 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms