RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZBTB10Q96DT7 871 aa33.36■■■□□ 2.93
CCM2-219ENST00000544363 UPF3AQ9H1J1 476 aaKnown RBP33.36■■■□□ 2.93
CCM2-219ENST00000544363 RRN3P2A6NIE6 340 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 RARBP10826 455 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 EPB41P11171 864 aaKnown RBP33.35■■■□□ 2.93
CCM2-219ENST00000544363 CLCN3P51790 818 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 MFSD10Q14728 455 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 MTHFD1LQ6UB35 978 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 TRIM59Q8IWR1 403 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 LINC01465Q8N7H1 131 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 TMEM134Q9H6X4 195 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 HAS3O00219 553 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 C6orf222P0C671 652 aaPredicted RBP33.35■■■□□ 2.93
CCM2-219ENST00000544363 CCND3P30281 292 aaPredicted RBP33.35■■■□□ 2.93
CCM2-219ENST00000544363 CASP4P49662 377 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 PSEN2P49810 448 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 MKNK1Q9BUB5 465 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 SPC25Q9HBM1 224 aa33.35■■■□□ 2.93
CCM2-219ENST00000544363 TISP43B9A030 160 aa33.34■■■□□ 2.93
CCM2-219ENST00000544363 ASAP2O43150 1006 aa33.34■■■□□ 2.93
CCM2-219ENST00000544363 KPNA6O60684 536 aa33.34■■■□□ 2.93
CCM2-219ENST00000544363 PSMC2P35998 433 aaKnown RBP33.34■■■□□ 2.93
CCM2-219ENST00000544363 CYP2J2P51589 502 aa33.34■■■□□ 2.93
CCM2-219ENST00000544363 NKX3-2P78367 333 aa33.34■■■□□ 2.93
CCM2-219ENST00000544363 NDST4Q9H3R1 872 aa33.34■■■□□ 2.93
CCM2-219ENST00000544363 METTL14Q9HCE5 456 aaKnown RBP33.34■■■□□ 2.93
CCM2-219ENST00000544363 ARMCX3Q9UH62 379 aaPredicted RBP33.34■■■□□ 2.93
CCM2-219ENST00000544363 K7ERI5 159 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 GSDMDP57764 484 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 MAP2K1Q02750 393 aaPredicted RBP33.33■■■□□ 2.93
CCM2-219ENST00000544363 STRN3Q13033 797 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 MARCH8Q5T0T0 291 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 MAP3K21Q5TCX8 1036 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 RHPN2Q8IUC4 686 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 KATNAL1Q9BW62 490 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 ITIH6Q6UXX5 1313 aa33.33■■■□□ 2.93
CCM2-219ENST00000544363 MYADML2A6NDP7 307 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 ANKRD63C9JTQ0 380 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 SMIM10L2AP0DMW4 78 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 SMIM10L2BP0DMW5 78 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 TMOD1P28289 359 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 PRMT2P55345 433 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 PURAQ00577 322 aaKnown RBP33.32■■■□□ 2.92
CCM2-219ENST00000544363 TBX2Q13207 712 aaPredicted RBP33.32■■■□□ 2.92
CCM2-219ENST00000544363 TFDP1Q14186 410 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 CDCA2Q69YH5 1023 aaPredicted RBP33.32■■■□□ 2.92
CCM2-219ENST00000544363 SETD4Q9NVD3 440 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 FRMD4BQ9Y2L6 1034 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 NRCAMQ92823 1304 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 EVPLQ92817 2033 aa33.32■■■□□ 2.92
CCM2-219ENST00000544363 A0A1W2PQC6 194 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 SRGAP2CP0DJJ0 459 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 EFNA5P52803 228 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 GNASQ5JWF2 1037 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 FKBP15Q5T1M5 1219 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 ARMCX5Q6P1M9 558 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 RNF149Q8NC42 400 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 CBWD1Q9BRT8 395 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP33.31■■■□□ 2.92
CCM2-219ENST00000544363 KAT6AQ92794 2004 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 SIP14410 1827 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 PHLPP2Q6ZVD8 1323 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 CHMP4BP1P59074 171 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 FAM186BQ8IYM0 893 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 LMBR1Q8WVP7 490 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 C2orf40Q9H1Z8 148 aa33.31■■■□□ 2.92
CCM2-219ENST00000544363 HNRNPDLO14979 420 aaKnown RBP33.3■■■□□ 2.92
CCM2-219ENST00000544363 EXOC3O60645 756 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 PGK1P00558 417 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 SLC39A4Q6P5W5 647 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 ZBTB8OSQ8IWT0 167 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 BICD1Q96G01 975 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 BORCS6Q96GS4 357 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 BEGAINQ9BUH8 593 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 PCIF1Q9H4Z3 704 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 HSPBP1Q9NZL4 362 aa33.3■■■□□ 2.92
CCM2-219ENST00000544363 PIGRP01833 764 aa33.29■■■□□ 2.92
CCM2-219ENST00000544363 GJB1P08034 283 aa33.29■■■□□ 2.92
CCM2-219ENST00000544363 HSPA6P17066 643 aa33.29■■■□□ 2.92
CCM2-219ENST00000544363 ADSSP30520 456 aa33.29■■■□□ 2.92
CCM2-219ENST00000544363 PPP2R3AQ06190 1150 aa33.29■■■□□ 2.92
CCM2-219ENST00000544363 XXYLT1Q8NBI6 393 aa33.29■■■□□ 2.92
CCM2-219ENST00000544363 ZEB2O60315 1214 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 ERGIC2Q96RQ1 377 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 CCDC113Q9H0I3 377 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 XPNPEP3Q9NQH7 507 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 ADAMTS4O75173 837 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 LIG4P49917 911 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 POU5F1BQ06416 359 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 SLAIN1Q8ND83 568 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 NLRP4Q96MN2 994 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 ZNF830Q96NB3 372 aaPredicted RBP33.28■■■□□ 2.92
CCM2-219ENST00000544363 MTG1Q9BT17 334 aaPredicted RBP33.28■■■□□ 2.92
CCM2-219ENST00000544363 TSKSQ9UJT2 592 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 AKT3Q9Y243 479 aa33.28■■■□□ 2.92
CCM2-219ENST00000544363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP33.28■■■□□ 2.92
CCM2-219ENST00000544363 GARTP22102 1010 aa33.27■■■□□ 2.92
CCM2-219ENST00000544363 ARID5BQ14865 1188 aa33.27■■■□□ 2.92
CCM2-219ENST00000544363 NFRKBQ6P4R8 1299 aa33.27■■■□□ 2.92
CCM2-219ENST00000544363 CCDC150Q8NCX0 1101 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms