RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 RARS2Q5T160 578 aaKnown RBP16.42■□□□□ 0.22
CHD4-210ENST00000544040 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
CHD4-210ENST00000544040 ZC3H15Q8WU90 426 aaKnown RBP16.42■□□□□ 0.22
CHD4-210ENST00000544040 F8W8V4 182 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 KCNA2P16389 499 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 ZNF699Q32M78 642 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 ADCK1Q86TW2 530 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 NDUFAF2Q8N183 169 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 ATP6V1G3Q96LB4 118 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 M0QYV0 167 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
CHD4-210ENST00000544040 TMCO5AQ8N6Q1 288 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 GPR101Q96P66 508 aaPredicted RBP16.41■□□□□ 0.22
CHD4-210ENST00000544040 MYL3P08590 195 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 NR1H3Q13133 447 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 NDFIP2Q9NV92 336 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 LOC102724159A0A0B4J2E5 919 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 PNMA6FA0A0J9YX94 578 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 APOA1P02647 267 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 NR3C1P04150 777 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 IFNAR1P17181 557 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 PWP2Q15269 919 aaKnown RBP16.41■□□□□ 0.22
CHD4-210ENST00000544040 NBPF20Q3BBV1 942 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 TAS2R42Q7RTR8 314 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.41■□□□□ 0.22
CHD4-210ENST00000544040 SERPINB13Q9UIV8 391 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 PGM1P36871 562 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 SF3B3Q15393 1217 aaKnown RBP16.41■□□□□ 0.22
CHD4-210ENST00000544040 OLFML2BQ68BL8 750 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 PATL1Q86TB9 770 aaKnown RBP16.41■□□□□ 0.22
CHD4-210ENST00000544040 ARHGEF25Q86VW2 580 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 ZNF668Q96K58 619 aaPredicted RBP16.41■□□□□ 0.22
CHD4-210ENST00000544040 LGALS16A8MUM7 142 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 ROR1Q01973 937 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 ABHD8Q96I13 439 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 UNC45AQ9H3U1 944 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 FAM96AQ9H5X1 160 aa16.41■□□□□ 0.22
CHD4-210ENST00000544040 NEMP1O14524 444 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 WDR47O94967 919 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 NFX1Q12986 1120 aaKnown RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 SNF8Q96H20 258 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 TCP11X1B4DZS4 312 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 SLC16A4O15374 487 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 hCG_1984214I3L0E3 225 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 ABCD1P33897 745 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 PRAMEP78395 509 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 SLFN12LQ6IEE8 588 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 CCDC137Q6PK04 289 aaKnown RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 ZNF713Q8N859 430 aaPredicted RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 SEL1LQ9UBV2 794 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 CAV1Q03135 178 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 CCDC144BQ3MJ40 725 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 UNC13DQ70J99 1090 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 IL17RAQ96F46 866 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 BRIP1Q9BX63 1249 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 KCNH2Q12809 1159 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 HEATR6Q6AI08 1181 aaKnown RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 TTC13Q8NBP0 860 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 CDHR1Q96JP9 859 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.4■□□□□ 0.222e-8■□□□□ 11.3
CHD4-210ENST00000544040 TAF1DQ9H5J8 278 aaPredicted RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 PIH1D3Q9NQM4 214 aaKnown RBP16.4■□□□□ 0.22
CHD4-210ENST00000544040 CYP26B1Q9NR63 512 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 KLHL11Q9NVR0 708 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 RAPGEF6Q8TEU7 1601 aa16.4■□□□□ 0.22
CHD4-210ENST00000544040 FBXW10Q5XX13 1052 aa16.39■□□□□ 0.22
CHD4-210ENST00000544040 HPCAL4Q9UM19 191 aa16.39■□□□□ 0.22
CHD4-210ENST00000544040 ENO4A6NNW6 628 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 IL10P22301 178 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 HIC1Q14526 733 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 CATSPER4Q7RTX7 472 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 LONP2Q86WA8 852 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 THAP11Q96EK4 314 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 PRDM5Q9NQX1 630 aaPredicted RBP16.39■□□□□ 0.21
CHD4-210ENST00000544040 MOCS2O96007 188 aaPredicted RBP16.39■□□□□ 0.21
CHD4-210ENST00000544040 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
CHD4-210ENST00000544040 MAP4P27816 1152 aaKnown RBP16.39■□□□□ 0.21
CHD4-210ENST00000544040 CNGA3Q16281 694 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 AFG1LQ8WV93 481 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 ZNF212Q9UDV6 495 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 TMEM35BQ8NCS4 154 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 ARMC2Q8NEN0 867 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 PIK3R2O00459 728 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 ATP9BO43861 1147 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 CDK8P49336 464 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 TFDP2Q14188 446 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 IZUMO3Q5VZ72 239 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 BTN2A2Q8WVV5 523 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 SH3KBP1Q96B97 665 aa16.39■□□□□ 0.21
CHD4-210ENST00000544040 TMA16Q96EY4 203 aaKnown RBP16.39■□□□□ 0.21
CHD4-210ENST00000544040 CLDN3O15551 220 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 RAD17O75943 681 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 TYK2P29597 1187 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 ALCAMQ13740 583 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms