RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 NPTX2P47972 431 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 AMHR2Q16671 573 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 DYMQ7RTS9 669 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 MYOCDQ8IZQ8 938 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 DEPTORQ8TB45 409 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 DDX12PQ92771 950 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 STAMQ92783 540 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 ADAM2Q99965 735 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 RGS18Q9NS28 235 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 AGPAT5Q9NUQ2 364 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 KBTBD4Q9NVX7 518 aa16.68■□□□□ 0.26
CD9-210ENST00000543916 FAM237AA0A1B0GTK4 181 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.67■□□□□ 0.26
CD9-210ENST00000543916 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.67■□□□□ 0.26
CD9-210ENST00000543916 TSPAN1O60635 241 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 PLS3P13797 630 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 NDUFA8P51970 172 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 ZNF131P52739 623 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 RABGGTBP53611 331 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 HERC6Q8IVU3 1022 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 ZBTB8OSQ8IWT0 167 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 FSIP1Q8NA03 581 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 PHOSPHO2Q8TCD6 241 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 MRPS27Q92552 414 aaKnown RBP16.67■□□□□ 0.26
CD9-210ENST00000543916 DNAJC19Q96DA6 116 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 CCDC113Q9H0I3 377 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 C2orf40Q9H1Z8 148 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 C17orf75Q9HAS0 396 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 SERTAD1Q9UHV2 236 aa16.67■□□□□ 0.26
CD9-210ENST00000543916 PIN4Q9Y237 131 aaKnown RBP16.67■□□□□ 0.26
CD9-210ENST00000543916 CCDC169A6NNP5 214 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 C9IYK1 514 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 B4GALT5O43286 388 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 ACTN4O43707 911 aaKnown RBP16.66■□□□□ 0.26
CD9-210ENST00000543916 ERLIN2O94905 339 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 FAM13AO94988 1023 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 EDN1P05305 212 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 HOXA11P31270 313 aaPredicted RBP16.66■□□□□ 0.26
CD9-210ENST00000543916 PBX2P40425 430 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 TTC3P53804 2025 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 DMP1Q13316 513 aaPredicted RBP16.66■□□□□ 0.26
CD9-210ENST00000543916 FAM117BQ6P1L5 589 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 TOP1MTQ969P6 601 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 TNMDQ9H2S6 317 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 FZD8Q9H461 694 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 KMT5AQ9NQR1 393 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 ARHGAP28Q9P2N2 729 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 TRIOBPQ9H2D6 2365 aa16.66■□□□□ 0.26
CD9-210ENST00000543916 TTLL13PA6NNM8 815 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 SLC16A4O15374 487 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 TBCAO75347 108 aaKnown RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 UPP2O95045 317 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 PRKCBP05771 671 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 ZSCAN20P17040 1043 aaPredicted RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 SARSP49591 514 aaKnown RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 SMAD3P84022 425 aaKnown RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 FAM187BQ17R55 369 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 LONRF3Q496Y0 759 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 FAM43BQ6ZT52 329 aaPredicted RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 SLC24A5Q71RS6 500 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 TAS1R3Q7RTX0 852 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 CRIPAKQ8N1N5 446 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 SPIRE2Q8WWL2 714 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 LRCH3Q96II8 777 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 CPB2Q96IY4 423 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 NTPCRQ9BSD7 190 aaKnown RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 PBX4Q9BYU1 374 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 ZHX3Q9H4I2 956 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 PARVGQ9HBI0 331 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 CHST12Q9NRB3 414 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 C1orf112Q9NSG2 853 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 PRMT7Q9NVM4 692 aaPredicted RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 LARSQ9P2J5 1176 aaKnown RBP16.65■□□□□ 0.26
CD9-210ENST00000543916 USP20Q9Y2K6 914 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 PHLPP2Q6ZVD8 1323 aa16.65■□□□□ 0.26
CD9-210ENST00000543916 GJB5O95377 273 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 MYOGP15173 224 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
CD9-210ENST00000543916 LIG1P18858 919 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 IBSPP21815 317 aaPredicted RBP16.64■□□□□ 0.25
CD9-210ENST00000543916 CASP1P29466 404 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 SYKP43405 635 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 EFNA5P52803 228 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 NCKAP1LP55160 1127 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.25
CD9-210ENST00000543916 GRAMD1CQ8IYS0 662 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 MYCT1Q8N699 235 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 TMEM161BQ8NDZ6 487 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 FIZ1Q96SL8 496 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 TRIM9Q9C026 710 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 YBX2Q9Y2T7 364 aaKnown RBP16.64■□□□□ 0.25
CD9-210ENST00000543916 FNDC1Q4ZHG4 1894 aaPredicted RBP16.64■□□□□ 0.25
CD9-210ENST00000543916 CNTNAP2Q9UHC6 1331 aa16.64■□□□□ 0.25
CD9-210ENST00000543916 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms