RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 UCHL3P15374 230 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 MARK3P27448 753 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 IGHMBP2P38935 993 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 TECP42680 631 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 KCNH2Q12809 1159 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 PRPF4BQ13523 1007 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 CALCRLQ16602 461 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 LETM2Q2VYF4 491 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 CC2D2BQ6DHV5 1058 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 BICDL1Q6ZP65 573 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 HEATR3Q7Z4Q2 680 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 BBOF1Q8ND07 529 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.37□□□□□ -1.55
LMO3-229ENST00000543721 SDR42E1Q8WUS8 393 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 OLFM3Q96PB7 478 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 RIOK1Q9BRS2 568 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 FOXP3Q9BZS1 431 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 DLGAP2Q9P1A6 1054 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 WHRNQ9P202 907 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 SEC63Q9UGP8 760 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 LRP5O75197 1615 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 CCDC88AQ3V6T2 1871 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 KIF13BQ9NQT8 1826 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 MAGEB2O15479 319 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 MAP3K13O43283 966 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 CALUO43852 315 aaPredicted RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 SLC18A1P54219 525 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 NAPAP54920 295 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 POLE2P56282 527 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 COASYQ13057 564 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 TBC1D25Q3MII6 688 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 PPP1R15BQ5SWA1 713 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 PHLDB3Q6NSJ2 640 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 FAM43BQ6ZT52 329 aaPredicted RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 DYMQ7RTS9 669 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 LCA5Q86VQ0 697 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 PNMA1Q8ND90 353 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 ART4Q93070 314 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 ZNF333Q96JL9 665 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 EPAS1Q99814 870 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 MMTAG2Q9BU76 263 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 SEMA4AQ9H3S1 761 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 SUDS3Q9H7L9 328 aaPredicted RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 PPCSQ9HAB8 311 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 NDUFA13Q9P0J0 144 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 LGALS13Q9UHV8 139 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 TNS2Q63HR2 1409 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 RPTORQ8N122 1335 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ERVV-1B6SEH8 477 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 DDX3YO15523 660 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 XRCC5P13010 732 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 ALAS1P13196 640 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 BRAFP15056 766 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ITIH2P19823 946 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 PTPN4P29074 926 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 PTGIRP43119 386 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 PTDSS1P48651 473 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 GALCP54803 685 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 PPATQ06203 517 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 SNX1Q13596 522 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 TCEAL1Q15170 157 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ENOX2Q16206 610 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 TMEM119Q4V9L6 283 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 C11orf63Q6NUN7 778 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 RGS9BPQ6ZS82 235 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ZNF365Q70YC5 407 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 FAM13CQ8NE31 585 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ZCRB1Q8TBF4 217 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 RASGRP4Q8TDF6 673 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 EPS8L3Q8TE67 593 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 SNX29Q8TEQ0 813 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 U2AF1L4Q8WU68 220 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 GPKOWQ92917 476 aaPredicted RBP eCLIP5.36□□□□□ -1.55
LMO3-229ENST00000543721 PPP1R14BQ96C90 147 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 OPTNQ96CV9 577 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 RPS6KC1Q96S38 1066 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 SYT15Q9BQS2 421 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 CENPKQ9BS16 269 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 TLE6Q9H808 572 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ZWILCHQ9H900 591 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ZNF287Q9HBT7 754 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 RYDENQ9NUL5 291 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 GRHL1Q9NZI5 618 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 SENP1Q9P0U3 644 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ATXN10Q9UBB4 475 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 LNPEPQ9UIQ6 1025 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 KCPQ6ZWJ8 1503 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ANKRD36CQ5JPF3 1778 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 ROBO3Q96MS0 1386 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 A8MUI8 341 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 USP17L12C9JPN9 530 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 USP17L21D6R901 530 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 SLC16A3O15427 465 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 CDH16O75309 829 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 PDHA1P08559 390 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 SFSWAPQ12872 951 aaKnown RBP5.36□□□□□ -1.55
LMO3-229ENST00000543721 STAT4Q14765 748 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 CYP1B1Q16678 543 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 DAB2IPQ5VWQ8 1189 aa5.36□□□□□ -1.55
LMO3-229ENST00000543721 LONP2Q86WA8 852 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms