RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 ITIH3Q06033 890 aa20.88■□□□□ 0.93
LTBR-211ENST00000543190 BMS1Q14692 1282 aaKnown RBP20.88■□□□□ 0.93
LTBR-211ENST00000543190 GLB1LQ6UWU2 654 aa20.88■□□□□ 0.93
LTBR-211ENST00000543190 CASP10Q92851 521 aa20.88■□□□□ 0.93
LTBR-211ENST00000543190 WRAP73Q9P2S5 460 aaPredicted RBP20.88■□□□□ 0.93
LTBR-211ENST00000543190 KMT2EQ8IZD2 1858 aa20.88■□□□□ 0.93
LTBR-211ENST00000543190 TDRD15B5MCY1 1934 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 INPPL1O15357 1258 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 CSDE1O75534 798 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 CSPG5O95196 566 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 FDPSP14324 419 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 RBM10P98175 930 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 PLPP4Q5VZY2 271 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 ERICH6BQ5W0A0 696 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 TWF2Q6IBS0 349 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 TRIM67Q6ZTA4 783 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 OTUD6AQ7L8S5 288 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 TMC7Q7Z402 723 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 DDX53Q86TM3 631 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 IFNLR1Q8IU57 520 aaPredicted RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 TCP11Q8WWU5 503 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 PSPC1Q8WXF1 523 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 TMEM169Q96HH4 297 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 ZNF668Q96K58 619 aaPredicted RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 LARP6Q9BRS8 491 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 ZSWIM4Q9H7M6 989 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 TBC1D13Q9NVG8 400 aa20.87■□□□□ 0.93
LTBR-211ENST00000543190 PIN4Q9Y237 131 aaKnown RBP20.87■□□□□ 0.93
LTBR-211ENST00000543190 CNTNAP2Q9UHC6 1331 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 CCNT1O60563 726 aaKnown RBP20.86■□□□□ 0.93
LTBR-211ENST00000543190 EIF5BO60841 1220 aaKnown RBP20.86■□□□□ 0.93
LTBR-211ENST00000543190 IBSPP21815 317 aaPredicted RBP20.86■□□□□ 0.93
LTBR-211ENST00000543190 HOXA11P31270 313 aaPredicted RBP20.86■□□□□ 0.93
LTBR-211ENST00000543190 YWHABP31946 246 aaKnown RBP20.86■□□□□ 0.93
LTBR-211ENST00000543190 ZXDAP98168 799 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 TPRNQ4KMQ1 711 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 NOMO2Q5JPE7 1267 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 CATSPER4Q7RTX7 472 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 OXER1Q8TDS5 423 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 PRPF31Q8WWY3 499 aaKnown RBP20.86■□□□□ 0.93
LTBR-211ENST00000543190 PGBD4Q96DM1 585 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 IGSF21Q96ID5 467 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 NECTIN4Q96NY8 510 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 LXNQ9BS40 222 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 ZBP1Q9H171 429 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 HCFC2Q9Y5Z7 792 aa20.86■□□□□ 0.93
LTBR-211ENST00000543190 OFD1O75665 1012 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 CTSAP10619 480 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 PBX3P40426 434 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 TECP42680 631 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 NPEPPSP55786 919 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 PLA2G4FQ68DD2 849 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 PIK3AP1Q6ZUJ8 805 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 CEP170P1Q96L14 293 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 HSD17B14Q9BPX1 270 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 SH2D3AQ9BRG2 576 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 NFKBIZQ9BYH8 718 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 ADAM7Q9H2U9 754 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 KANSL3Q9P2N6 904 aa20.85■□□□□ 0.93
LTBR-211ENST00000543190 ORC3Q9UBD5 711 aaPredicted RBP20.85■□□□□ 0.93
LTBR-211ENST00000543190 MTCL1Q9Y4B5 1905 aaKnown RBP20.84■□□□□ 0.93
LTBR-211ENST00000543190 GALTP07902 379 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 AK2P54819 239 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 LAMTOR4Q0VGL1 99 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 MXD4Q14582 209 aaPredicted RBP20.84■□□□□ 0.93
LTBR-211ENST00000543190 EARS2Q5JPH6 523 aaKnown RBP20.84■□□□□ 0.93
LTBR-211ENST00000543190 FERMT3Q86UX7 667 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 KSR1Q8IVT5 923 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 ZNF579Q8NAF0 562 aaKnown RBP20.84■□□□□ 0.93
LTBR-211ENST00000543190 RNF169Q8NCN4 708 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 CNNM3Q8NE01 707 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 GTF3C6Q969F1 213 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 CCDC51Q96ER9 411 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 NLRP4Q96MN2 994 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 PRRX2Q99811 253 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 NRDE2Q9H7Z3 1164 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 PCDHB2Q9Y5E7 798 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 ZMYM2Q9UBW7 1377 aa20.84■□□□□ 0.93
LTBR-211ENST00000543190 CLASP2O75122 1294 aaKnown RBP20.83■□□□□ 0.93
LTBR-211ENST00000543190 SLITRK3O94933 977 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 BAG4O95429 457 aaKnown RBP20.83■□□□□ 0.93
LTBR-211ENST00000543190 AXLP30530 894 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 SIGLEC14Q08ET2 396 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 AGMOQ6ZNB7 445 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 TMEM173Q86WV6 379 aaPredicted RBP20.83■□□□□ 0.93
LTBR-211ENST00000543190 VPS52Q8N1B4 723 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 TMEM175Q9BSA9 504 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 MINDY3Q9H8M7 445 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 BRMS1Q9HCU9 246 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 UBN1Q9NPG3 1134 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 GJB4Q9NTQ9 266 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 ANKEF1Q9NU02 776 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 DZANK1Q9NVP4 752 aa20.83■□□□□ 0.93
LTBR-211ENST00000543190 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.93
LTBR-211ENST00000543190 TMEM221A6NGB7 291 aa20.82■□□□□ 0.92
LTBR-211ENST00000543190 MEIS3P2A8K0S8 358 aa20.82■□□□□ 0.92
LTBR-211ENST00000543190 M0R296 226 aa20.82■□□□□ 0.92
LTBR-211ENST00000543190 ZC3H11AO75152 810 aaKnown RBP eCLIP20.82■□□□□ 0.92
LTBR-211ENST00000543190 EFEMP2O95967 443 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms