RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 NUB1Q9Y5A7 615 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 ST20-MTHFSA0A0A6YYL1 179 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 PRAMEF25A6NGN4 478 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 H3BS24 57 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 ELL2O00472 640 aaPredicted RBP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 FOXP2O15409 715 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 HTRA2O43464 458 aaPredicted RBP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 AGR2O95994 175 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 FUCA1P04066 466 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 HSD3B1P14060 373 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 PTPN1P18031 435 aaKnown RBP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 DDIT3P35638 169 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 MAPK9P45984 424 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 IKZF1Q13422 519 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 KCNMB1Q16558 191 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 GAB4Q2WGN9 574 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 PAN2Q504Q3 1202 aaKnown RBP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 MROH9Q5TGP6 573 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 IZUMO3Q5VZ72 239 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 MAEAQ7L5Y9 396 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 WAPLQ7Z5K2 1190 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 RIOX2Q8IUF8 465 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 SPACA3Q8IXA5 215 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 TMEM52Q8NDY8 209 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 TSPEARQ8WU66 669 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 RIN2Q8WYP3 895 aaPredicted RBP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 SKA1Q96BD8 255 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 GCC1Q96CN9 775 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 TBATAQ96M53 351 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 ACE2Q9BYF1 805 aaPredicted RBP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 BTBD1Q9H0C5 482 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 KMT5AQ9NQR1 393 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 PRDM7Q9NQW5 492 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 RIC8BQ9NVN3 520 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 ZSWIM5Q9P217 1185 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 DPP7Q9UHL4 492 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 NRBP1Q9UHY1 535 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 STXBP5LQ9Y2K9 1186 aa4.73□□□□□ -1.65
SFSWAP-211ENST00000542813 UBA6A0AVT1 1052 aaPredicted RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 FAM90A27PA6NNH2 459 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 NCK2O43639 380 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 MAFKO60675 156 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 C4BPAP04003 597 aaKnown RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 EDNRBP24530 442 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 RPL10P27635 214 aaKnown RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 EPHA5P54756 1037 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 LGALS4P56470 323 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 CCT2P78371 535 aaKnown RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 CDK17Q00537 523 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 SETQ01105 290 aaPredicted RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 ICA1Q05084 483 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 ZP2Q05996 745 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 TUSC3Q13454 348 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 SPIDRQ14159 915 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 SNX17Q15036 470 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 ANO4Q32M45 955 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 TTC38Q5R3I4 469 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 BTBD8Q5XKL5 378 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 TIGD7Q6NT04 549 aaPredicted RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 SYDE1Q6ZW31 735 aaPredicted RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 THAP5Q7Z6K1 395 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 OXR1Q8N573 874 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 KLHDC4Q8TBB5 520 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 PLEKHO2Q8TD55 490 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 ERCC4Q92889 916 aaPredicted RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 PHKBQ93100 1093 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 TUBGCP5Q96RT8 1024 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 MTA3Q9BTC8 594 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 MYL10Q9BUA6 226 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 PRDM12Q9H4Q4 367 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 DCP1AQ9NPI6 582 aaPredicted RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 PADI4Q9UM07 663 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 GPR52Q9Y2T5 361 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 RWDD3Q9Y3V2 267 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 SNX13Q9Y5W8 968 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 IFT140Q96RY7 1462 aa4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 URB2Q14146 1524 aaKnown RBP4.72□□□□□ -1.65
SFSWAP-211ENST00000542813 A0A087WV62 115 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 ZNF503-AS2A6NEH8 195 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 SLC27A2O14975 620 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 EPB41L2O43491 1005 aaKnown RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 PPP1R11O60927 126 aaPredicted RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 PRPF6O94906 941 aaKnown RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 APOL3O95236 402 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 MYF5P13349 255 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 CLCN7P51798 805 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 MAPK10P53779 464 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 GPSM2P81274 684 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 TEKQ02763 1124 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 DDX10Q13206 875 aaKnown RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 BLMHQ13867 455 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 TRIM25Q14258 630 aaKnown RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 MLANAQ16655 118 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 NKPD1Q17RQ9 610 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 C3orf36Q3SXR2 165 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 CCDC38Q502W7 563 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 CCDC157Q569K6 752 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms