RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 C11orf84Q9BUA3 381 aaPredicted RBP17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 TMEM117Q9H0C3 514 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 BHMT2Q9H2M3 363 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 SKIP12755 728 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 MBTD1Q05BQ5 628 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 SF3A1Q15459 793 aaKnown RBP17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 UBXN11Q5T124 520 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 TWF2Q6IBS0 349 aaKnown RBP17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 KCTD17Q8N5Z5 321 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 AK8Q96MA6 479 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 PNMA5Q96PV4 448 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 CWH43Q9H720 699 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 PRDM6Q9NQX0 595 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 FAM105AQ9NUU6 356 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 DNM3Q9UQ16 869 aa17.14■□□□□ 0.33
ECHDC2-223ENST00000542552 E9PMD0 336 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 GRM6O15303 877 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 STX6O43752 255 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 TSPAN1O60635 241 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 AXLP30530 894 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 RAB27AP51159 221 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 PTPAQ15257 358 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 CDCA2Q69YH5 1023 aaPredicted RBP17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 LRRC55Q6ZSA7 311 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 MAEAQ7L5Y9 396 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 MRPL10Q7Z7H8 261 aaKnown RBP17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 HSCBQ8IWL3 235 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 MICALL1Q8N3F8 863 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 BSNDQ8WZ55 320 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
ECHDC2-223ENST00000542552 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 SLC26A4O43511 780 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 PTPROQ16827 1216 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 RSPH1Q8WYR4 309 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 CCDC51Q96ER9 411 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 LMAN2LQ9H0V9 348 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 HCSTQ9UBK5 93 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 CLIC4Q9Y696 253 aa17.12■□□□□ 0.33
ECHDC2-223ENST00000542552 MYO7AQ13402 2215 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 ERLIN2O94905 339 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 ITGB1P05556 798 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 NAMPTP43490 491 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 GRIN1Q05586 938 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 CAMK1Q14012 370 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 C1orf186Q6ZWK4 172 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 KIFAP3Q92845 792 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 NT5C3AQ9H0P0 336 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 FZD8Q9H461 694 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 ZSCAN16Q9H4T2 348 aaPredicted RBP17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 MORC2Q9Y6X9 1032 aaPredicted RBP17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 BRWD1Q9NSI6 2320 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 PLXNA4Q9HCM2 1894 aa17.11■□□□□ 0.33
ECHDC2-223ENST00000542552 CUL9Q8IWT3 2517 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 LRRIQ4A6NIV6 560 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 MEIS3P2A8K0S8 358 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 ARF4P18085 180 aaPredicted RBP17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 DNAJB1P25685 340 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 FAM187BQ17R55 369 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 RINT1Q6NUQ1 792 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 NOTUMQ6P988 496 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 CABP7Q86V35 215 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 ABI1Q8IZP0 508 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 DAW1Q8N136 415 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 COLGALT1Q8NBJ5 622 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 LPPQ93052 612 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 C2orf40Q9H1Z8 148 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 ALG13Q9NP73 1137 aaKnown RBP17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 AAASQ9NRG9 546 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 THEGQ9P2T0 379 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 PCDHB12Q9Y5F1 795 aa17.1■□□□□ 0.33
ECHDC2-223ENST00000542552 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 MUC3AQ02505 3323 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 A0A1B0GUA9 196 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 B4GALT5O43286 388 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 OFD1O75665 1012 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 LAG3P18627 525 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 NCLP19338 710 aaKnown RBP17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 NCBP1Q09161 790 aaKnown RBP17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 MAPK7Q13164 816 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 TIGD5Q53EQ6 642 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 SYT2Q8N9I0 419 aaPredicted RBP17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms