RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 ASGR2P07307 311 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 FGD1P98174 961 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 GIT2Q14161 759 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 MTERF2Q49AM1 385 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 NOMO2Q5JPE7 1267 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 RARS2Q5T160 578 aaKnown RBP13.67□□□□□ -0.22
COPS7A-213ENST00000542150 MOXD1Q6UVY6 613 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 KSR1Q8IVT5 923 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 ATOH1Q92858 354 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-213ENST00000542150 SCLT1Q96NL6 688 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 SH2D3AQ9BRG2 576 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 NCOA5Q9HCD5 579 aaKnown RBP13.67□□□□□ -0.22
COPS7A-213ENST00000542150 FAM105AQ9NUU6 356 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 SUCLA2Q9P2R7 463 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-213ENST00000542150 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 LIMD1Q9UGP4 676 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
COPS7A-213ENST00000542150 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 SKIP12755 728 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 SFPQP23246 707 aaKnown RBP eCLIP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 SLC11A1P49279 550 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 ATAT1Q5SQI0 421 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 AGMOQ6ZNB7 445 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 MRPL10Q7Z7H8 261 aaKnown RBP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 ZBTB33Q86T24 672 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 ZNF280BQ86YH2 543 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 SNX27Q96L92 541 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
COPS7A-213ENST00000542150 INO80BQ9C086 356 aaPredicted RBP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 SEPT9Q9UHD8 586 aaPredicted RBP13.66□□□□□ -0.22
COPS7A-213ENST00000542150 EML1O00423 815 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 DDHD2O94830 711 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 EFEMP2O95967 443 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 NBL1P41271 181 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 DNM2P50570 870 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 RAB27AP51159 221 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 AFF1P51825 1210 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 NLRP5P59047 1200 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 TOB2Q14106 344 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 BMS1Q14692 1282 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 UBXN11Q5T124 520 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 TWF2Q6IBS0 349 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 ASCL5Q7RTU5 278 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 GPR149Q86SP6 731 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 RHPN2Q8IUC4 686 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 TDRD5Q8NAT2 981 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 DAGLBQ8NCG7 672 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 KLHL5Q96PQ7 755 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 AGPAT5Q9NUQ2 364 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 PIN4Q9Y237 131 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
COPS7A-213ENST00000542150 PTPRZ1P23471 2315 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 MYH9P35579 1960 aaKnown RBP13.65□□□□□ -0.22
COPS7A-213ENST00000542150 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
COPS7A-213ENST00000542150 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 NPR3P17342 541 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 CLCN4P51793 760 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 CLCN5P51795 746 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 PSMC5P62195 406 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
COPS7A-213ENST00000542150 TMC5Q6UXY8 1006 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 PPFIBP1Q86W92 1011 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 BLIDQ8IZY5 108 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 MINDY3Q9H8M7 445 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 CYP26B1Q9NR63 512 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 WRAP73Q9P2S5 460 aaPredicted RBP13.64□□□□□ -0.23
COPS7A-213ENST00000542150 VAV3Q9UKW4 847 aa13.64□□□□□ -0.23
COPS7A-213ENST00000542150 SLC37A4O43826 429 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 PAPLNO95428 1278 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 CNPP09543 421 aaKnown RBP13.63□□□□□ -0.23
COPS7A-213ENST00000542150 NPEPPSP55786 919 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 PPP2R5CQ13362 524 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 PLA2G4FQ68DD2 849 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 CWF19L1Q69YN2 538 aaKnown RBP13.63□□□□□ -0.23
COPS7A-213ENST00000542150 CATSPER4Q7RTX7 472 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 CABP7Q86V35 215 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-213ENST00000542150 PGBD4Q96DM1 585 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 NLRP4Q96MN2 994 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 JPH2Q9BR39 696 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-213ENST00000542150 TMEM175Q9BSA9 504 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
COPS7A-213ENST00000542150 SFXN1Q9H9B4 322 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 ZSWIM6Q9HCJ5 1215 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 STK39Q9UEW8 545 aa13.63□□□□□ -0.23
COPS7A-213ENST00000542150 DDX25Q9UHL0 483 aaKnown RBP13.63□□□□□ -0.23
COPS7A-213ENST00000542150 DBR1Q9UK59 544 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms