RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.52
NECAP1-206ENST00000542095 PRDM10Q9NQV6 1147 aa11.77□□□□□ -0.52
NECAP1-206ENST00000542095 TBX20Q9UMR3 447 aa11.77□□□□□ -0.52
NECAP1-206ENST00000542095 L1RE1Q9UN81 338 aa11.77□□□□□ -0.52
NECAP1-206ENST00000542095 SNCAIPQ9Y6H5 919 aa11.77□□□□□ -0.52
NECAP1-206ENST00000542095 GRID2IPA4D2P6 1211 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 SPATA31C2B4DYI2 1134 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 H2AFZP0C0S5 128 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 CXCR5P32302 372 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 NPTX2P47972 431 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 VGLL4Q14135 290 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 CFAP221Q4G0U5 840 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 MEI1Q5TIA1 1274 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 SWSAP1Q6NVH7 229 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 H2AFVQ71UI9 128 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 TMEM161BQ8NDZ6 487 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 MCPH1Q8NEM0 835 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 SPATA4Q8NEY3 305 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 DNERQ8NFT8 737 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 SPIRE2Q8WWL2 714 aa11.77□□□□□ -0.53
NECAP1-206ENST00000542095 A0A0A6YYK5 440 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 DDX3XO00571 662 aaKnown RBP eCLIP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 ZNF862O60290 1169 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 DGAT1O75907 488 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 FTCDO95954 541 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 NOP2P46087 812 aaKnown RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 ACTR2P61160 394 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 DLG4P78352 724 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 STXBP2Q15833 593 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 MAP4K3Q8IVH8 894 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 RUBCNQ92622 972 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 UBXN6Q9BZV1 441 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 GPR88Q9GZN0 384 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 CSADQ9Y600 493 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 PFASO15067 1338 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 DENND3A2RUS2 1198 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 PMM2O15305 246 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 STBD1O95210 358 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 SP4Q02446 784 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 PPP3CAQ08209 521 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 GPS2Q13227 327 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 SMC1AQ14683 1233 aaKnown RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 ABHD15Q6UXT9 468 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 U2AF1L4Q8WU68 220 aaKnown RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
NECAP1-206ENST00000542095 FBXO40Q9UH90 709 aa11.76□□□□□ -0.53
NECAP1-206ENST00000542095 SUPT20HL2P0C7V6 817 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 ICAM3P32942 547 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 ABCD1P33897 745 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 GCLMP48507 274 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 RTP1P59025 263 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 PRKCEQ02156 737 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 ARHGAP44Q17R89 818 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 EPC2Q52LR7 807 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-206ENST00000542095 ANKRD35Q8N283 1001 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 SLC30A5Q8TAD4 765 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-206ENST00000542095 LMBR1Q8WVP7 490 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 TAF4BQ92750 862 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
NECAP1-206ENST00000542095 ATP6V0A4Q9HBG4 840 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 IGSF9BQ9UPX0 1349 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 H0YCG3 227 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 CES2O00748 559 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 CNGA1P29973 690 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 MXI1P50539 228 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-206ENST00000542095 KIF22Q14807 665 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 SNRNP35Q16560 246 aaKnown RBP11.75□□□□□ -0.53
NECAP1-206ENST00000542095 XKR3Q5GH77 459 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 C1orf220Q5T0J3 134 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 TREML2Q5T2D2 321 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 LBX2Q6XYB7 198 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 SULF1Q8IWU6 871 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 BSNDQ8WZ55 320 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 IFT74Q96LB3 600 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 KIFC3Q9BVG8 833 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 UBE2TQ9NPD8 197 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-206ENST00000542095 PDLIM7Q9NR12 457 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 CYP26B1Q9NR63 512 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 ST7Q9NRC1 585 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 KCNG1Q9UIX4 513 aa11.75□□□□□ -0.53
NECAP1-206ENST00000542095 GOLGA8IPA6NC78 632 aa11.74□□□□□ -0.53
NECAP1-206ENST00000542095 GOLGA8JA6NMD2 632 aa11.74□□□□□ -0.53
NECAP1-206ENST00000542095 ANKRD63C9JTQ0 380 aa11.74□□□□□ -0.53
NECAP1-206ENST00000542095 DDNO94850 711 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-206ENST00000542095 ADRB2P07550 413 aa11.74□□□□□ -0.53
NECAP1-206ENST00000542095 TNFAIP3P21580 790 aa11.74□□□□□ -0.53
NECAP1-206ENST00000542095 CASP8Q14790 479 aa11.74□□□□□ -0.53
NECAP1-206ENST00000542095 RPS6KA1Q15418 735 aa11.74□□□□□ -0.53
NECAP1-206ENST00000542095 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms