RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 EXOC8Q8IYI6 725 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 SLC22A17Q8WUG5 538 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 STAMQ92783 540 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 LENG9Q96B70 501 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
SNHG1-216ENST00000541416 GBP3Q9H0R5 595 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 MRPL17Q9NRX2 175 aaKnown RBP13.78□□□□□ -0.2
SNHG1-216ENST00000541416 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 IGSF9Q9P2J2 1179 aa13.78□□□□□ -0.2
SNHG1-216ENST00000541416 A0A087WZ62 844 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 DKC1O60832 514 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■□□ 15.6
SNHG1-216ENST00000541416 ZNF623O75123 536 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 CSDE1O75534 798 aaKnown RBP13.77□□□□□ -0.21
SNHG1-216ENST00000541416 ALDH2P05091 517 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 AOC1P19801 751 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 TARBP2Q15633 366 aaKnown RBP13.77□□□□□ -0.21
SNHG1-216ENST00000541416 CYP26C1Q6V0L0 522 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 AUTS2Q8WXX7 1259 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 SLC5A5Q92911 643 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
SNHG1-216ENST00000541416 RNF26Q9BY78 433 aaPredicted RBP13.77□□□□□ -0.21
SNHG1-216ENST00000541416 SEMA4AQ9H3S1 761 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 SUCLA2Q9P2R7 463 aaPredicted RBP13.77□□□□□ -0.21
SNHG1-216ENST00000541416 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
SNHG1-216ENST00000541416 CNTNAP2Q9UHC6 1331 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 STK25O00506 426 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 NLRP5P59047 1200 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 PTPN14Q15678 1187 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 UGCGQ16739 394 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 LETM2Q2VYF4 491 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 ADCK5Q3MIX3 580 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 BMP2KLQ5H9B9 411 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 TMEM173Q86WV6 379 aaPredicted RBP13.76□□□□□ -0.21
SNHG1-216ENST00000541416 CCDC105Q8IYK2 499 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 ADSSL1Q8N142 457 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 LPPQ93052 612 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 TMEM175Q9BSA9 504 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 UNC45AQ9H3U1 944 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 SMOC2Q9H3U7 446 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 UBN1Q9NPG3 1134 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
SNHG1-216ENST00000541416 WDR87Q6ZQQ6 2873 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 IGKV6-21A0A0C4DH24 114 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
SNHG1-216ENST00000541416 NR1I2O75469 434 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 OFD1O75665 1012 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 URODP06132 367 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 ADH1AP07327 375 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 ID4P47928 161 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 SLC11A1P49279 550 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 CLCN4P51793 760 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 ANGPT1Q15389 498 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 LONRF3Q496Y0 759 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 Q4G0T1 1027 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 Q6ZUG5 572 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 SIX5Q8N196 739 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 CNNM3Q8NE01 707 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 BRF1Q92994 677 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 PHKBQ93100 1093 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 NXPE3Q969Y0 559 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 NLRP4Q96MN2 994 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 AGPAT5Q9NUQ2 364 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 FAN1Q9Y2M0 1017 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 PPME1Q9Y570 386 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 DENND4AQ7Z401 1863 aa13.75□□□□□ -0.21
SNHG1-216ENST00000541416 NID2Q14112 1375 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 FRYLO94915 3013 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 PSMD10O75832 226 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 CNPP09543 421 aaKnown RBP13.74□□□□□ -0.21
SNHG1-216ENST00000541416 NCBP1Q09161 790 aaKnown RBP13.74□□□□□ -0.21
SNHG1-216ENST00000541416 DRP2Q13474 957 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 CWF19L1Q69YN2 538 aaKnown RBP13.74□□□□□ -0.21
SNHG1-216ENST00000541416 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 DTWD2Q8NBA8 298 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 CMASQ8NFW8 434 aaPredicted RBP13.74□□□□□ -0.21
SNHG1-216ENST00000541416 KCNG4Q8TDN1 519 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 TBCKQ8TEA7 893 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 KLHL5Q96PQ7 755 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 RSAD1Q9HA92 442 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 WNT16Q9UBV4 365 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 DNAJB4Q9UDY4 337 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 DMDP11532 3685 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 DCHS1Q96JQ0 3298 aa13.74□□□□□ -0.21
SNHG1-216ENST00000541416 RIF1Q5UIP0 2472 aaKnown RBP13.73□□□□□ -0.21
SNHG1-216ENST00000541416 FAM186AA6NE01 2351 aa13.73□□□□□ -0.21
SNHG1-216ENST00000541416 SSBP05455 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNHG1-216ENST00000541416 IFNAR1P17181 557 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms