RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 RFPL2O75678 378 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 PSAPP07602 524 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 GLULP15104 373 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 TMOD1P28289 359 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 AFF1P51825 1210 aaKnown RBP13.34□□□□□ -0.27
COPA-205ENST00000541366 FUT2Q10981 343 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 GIT2Q14161 759 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 UGCGQ16739 394 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 RSPO4Q2I0M5 234 aaPredicted RBP13.34□□□□□ -0.27
COPA-205ENST00000541366 NOMO2Q5JPE7 1267 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 ZNF746Q6NUN9 644 aaPredicted RBP13.34□□□□□ -0.27
COPA-205ENST00000541366 PPFIBP1Q86W92 1011 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 GPR152Q8TDT2 470 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 SH2D3AQ9BRG2 576 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 MTA3Q9BTC8 594 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 SEMA4AQ9H3S1 761 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 CEP131Q9UPN4 1083 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 CFAP47Q6ZTR5 3102 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 COL4A3Q01955 1670 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 OFD1O75665 1012 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 DDHD2O94830 711 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 OATP04181 439 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 PRKCEQ02156 737 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 RNASELQ05823 741 aaKnown RBP13.33□□□□□ -0.28
COPA-205ENST00000541366 AP3B2Q13367 1082 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 TWF2Q6IBS0 349 aaKnown RBP13.33□□□□□ -0.28
COPA-205ENST00000541366 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 POTEHQ6S545 545 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 TAS1R1Q7RTX1 841 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 SUMF1Q8NBK3 374 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 RUBCNQ92622 972 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 EMILIN2Q9BXX0 1053 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 FOXQ1Q9C009 403 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 MAN1C1Q9NR34 630 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 TBC1D22BQ9NU19 505 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 PIN4Q9Y237 131 aaKnown RBP13.33□□□□□ -0.28
COPA-205ENST00000541366 SAMM50Q9Y512 469 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 DOCK6Q96HP0 2047 aa13.33□□□□□ -0.28
COPA-205ENST00000541366 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
COPA-205ENST00000541366 A0A087WZ62 844 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 CCDC195A0A1B0GUA6 201 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 SLC27A2O14975 620 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 CYP3A4P08684 503 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 SPATA31D3P0C874 917 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 TBC1D8BQ0IIM8 1120 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 PRR16Q569H4 304 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 GLB1LQ6UWU2 654 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 SPATA31D4Q6ZUB0 917 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 C1orf210Q8IVY1 113 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 SMAP1Q8IYB5 467 aaPredicted RBP13.32□□□□□ -0.28
COPA-205ENST00000541366 MAML2Q8IZL2 1156 aaPredicted RBP13.32□□□□□ -0.28
COPA-205ENST00000541366 PIP4P2Q8N4L2 257 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 GJA10Q969M2 543 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 FAM167AQ96KS9 214 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 FDXACB1Q9BRP7 624 aaPredicted RBP13.32□□□□□ -0.28
COPA-205ENST00000541366 WDR6Q9NNW5 1121 aaKnown RBP13.32□□□□□ -0.28
COPA-205ENST00000541366 FAM105AQ9NUU6 356 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 BARHL2Q9NY43 387 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 TCEAL9Q9UHQ7 104 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 CLUHO75153 1309 aa13.32□□□□□ -0.28
COPA-205ENST00000541366 INPPL1O15357 1258 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 CHMP2AO43633 222 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 SRFP11831 508 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 AK2P54819 239 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 APOA5Q6Q788 366 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 AGMOQ6ZNB7 445 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 SGMS1Q86VZ5 419 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 KSR1Q8IVT5 923 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 RPP25Q9BUL9 199 aaKnown RBP13.31□□□□□ -0.28
COPA-205ENST00000541366 GCOM2Q9BZD3 368 aaPredicted RBP13.31□□□□□ -0.28
COPA-205ENST00000541366 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 CHST12Q9NRB3 414 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 DISC1Q9NRI5 854 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 NRBP2Q9NSY0 501 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 EPS15L1Q9UBC2 864 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 BRPF3Q9ULD4 1205 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 SIT1Q9Y3P8 196 aa13.31□□□□□ -0.28
COPA-205ENST00000541366 F8W810 466 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 NRP1O14786 923 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 TEX28O15482 410 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 CDC27P30260 824 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 ZC3H14Q6PJT7 736 aaKnown RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 CMASQ8NFW8 434 aaPredicted RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 SMG7Q92540 1137 aaKnown RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 LENG9Q96B70 501 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 TRAIPQ9BWF2 469 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 LSG1Q9H089 658 aaKnown RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 MRPL17Q9NRX2 175 aaKnown RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
COPA-205ENST00000541366 FAN1Q9Y2M0 1017 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms